Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3294 |
Symbol | |
ID | 5059759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3780133 |
End bp | 3780966 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475542 |
Product | cytochrome c, class I |
Protein accession | YP_001160106 |
Protein GI | 145595809 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.79873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.176806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTG ACAACGACCG CCGACGCGGT CTGTTCGCGC GGCTGCGCGG GCGGCCCGCG GCGCGCAGCA GGGGCCGCCG CCGCCTGGGT GCCGCGGTCC GGCTGCTAGC AGCGCTGATG CTGGCCGGCG GCGCCTACAC TGCCTTCGCC CCCAGCGTGC AGGCGCAGGA CACACAGATG TCCGGCGCCG CCACGGACGG CAAGGCGCTG TTCAACGAAA GCTGTGTGAG CTGCCACGGT CGCAACGCGC AGGGCGTCGA GGGGCGCGGC CCGAGCCTGG TCGGCGTTGG CTCCGCCTCG GTCGAGTTCC AGGTGGGCAC GGGTCGGATG CCGATGGTCC GTCAGGAGGC CCAGGCGCCC CGCAAGCCTC CGGTCTTCAG CGACGATGAG ATCCGTCAGC TCGGGCAGTA CATCCAGGAG CTTGGCGGCG GCCCGGAGGT GCCGGCCGGC GAGGATCTTC ACAAGGGCGG CAACCTCGCC GCCGGTGGTG AACTGTTCCG GATCAACTGC TCGCAGTGTC ACGCCTTCGG CGGTGGCGGC GGAGCCCTCT CCTCGGGGAA GTACGCGCCG AGCCTGAAGC CCGCCACCGA CCGTCAGATC TACGCCGCGA TGCTCAGTGG ACCGCAGAAC ATGCCGGTGT TCGGGGACAA CCAGATCACG CCCGAGCAGA AGGCGGACAT CATCGCCTAC ATCCAGGAGA ACCTGAACCA CAACCAGGAC CCGGGTGGCT TCAACCTCGG CCGCTACGGC CCCTCGACCG AGGGCCTGGC GATCTTCCTG GTCGGCATCG TCGCGCTGGT CTTTACCACC CTGTGGATTG CAGGTAAGTC GTGA
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Protein sequence | MTSDNDRRRG LFARLRGRPA ARSRGRRRLG AAVRLLAALM LAGGAYTAFA PSVQAQDTQM SGAATDGKAL FNESCVSCHG RNAQGVEGRG PSLVGVGSAS VEFQVGTGRM PMVRQEAQAP RKPPVFSDDE IRQLGQYIQE LGGGPEVPAG EDLHKGGNLA AGGELFRINC SQCHAFGGGG GALSSGKYAP SLKPATDRQI YAAMLSGPQN MPVFGDNQIT PEQKADIIAY IQENLNHNQD PGGFNLGRYG PSTEGLAIFL VGIVALVFTT LWIAGKS
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