Gene Strop_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3293 
Symbol 
ID5059758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3778980 
End bp3780065 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID640475541 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001160105 
Protein GI145595808 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.714442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.272111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCCACCCTGG GCACTCGGGC GGCGACCAGC CGGTTGACCT GGATGACCCG 
GATCTCAGTC GCTTCGACAT CGTTCGTGCG GGTGCTCGTG AGGACGACAT CGAGATCGTC
CACTACGAGC CCCAGGTTGT GCCGGGCAGC AAGGCCGAGC GTCGACTGAG CCGGACGGTC
GCCCTGTTCT TCCTGCTGAC CGGGTTCTCC GCGACCGCCT TCCTGGCGAT CTACATCTGG
TGGCCGTGGG AGTACGAGCT GGGCTATGGC GGTGACAAGT GGTACACGCC GCTGCTCGGT
GTCACCCTGG GCATCTCCCT GCTGGGCATC GGCTTCGGCA TCCTCACCTG GGGTAAGAAG
CTGCTGCCCA AGGAGGTCTC GGTCCAGGAC CGGCATGAGG GCGCGGTCAA CGAGCGGGAC
CGCACCATCA CCGCCCAGAC GATGCTCTAC ATGGCCGACG AGCTGGGCGT GAAGCGCCGG
CCGTTGCTGG GAGTCTCGCT GCTGGCCGGT CTCGCGCCAG TCGGCGCGGT GGCCGCGGCG
CCGTTGGTGG GTGGCCTGAT CTCGCAGCCG CACAAGAACA ACCAGATGTT CACCACGGGC
TTCGCGCCCA CCGAGGGCGG ACAGAAGGTC CGGCTGGTCC GTGAGGACGG CCGCCCGATC
CGTCCGGCGG ACATCAGCAC TGGTGGTCAG ATCACCGTCT TTCCCGGCAT TGAGCACGGG
GTGAGCAACC AGTATGCGGA CTCGCCGGCG CTGCTGATTC ACCTTCGGGA TGCGGATGCG
CAGGAGGCCC GCGAGGCCAA CGTGCGGATC GGCCACGATG ACTACATGTG GGGCAACTTC
GCCGCCTACT CGAAGATCTG CACCCACGCT GGCTGCCCCG CCAGCCTCTA CGAACAGCAG
ACCAACCGGC TGCTCTGCCC GTGCCACCAG TCGCAGTTCC TGATCACCGA CAACGCGAAG
CCCATCTTCG GTCCCGCCAG CCGGCGGCTG CCGCAGTTGC CGATCGTCGT TGACGACGAG
GGTTACTTCG TGGCGACGTC CGACTACACC GAGACCGTCG GACCCGACTT CTGGGAGCGG
CCGTGA
 
Protein sequence
MTTTHPGHSG GDQPVDLDDP DLSRFDIVRA GAREDDIEIV HYEPQVVPGS KAERRLSRTV 
ALFFLLTGFS ATAFLAIYIW WPWEYELGYG GDKWYTPLLG VTLGISLLGI GFGILTWGKK
LLPKEVSVQD RHEGAVNERD RTITAQTMLY MADELGVKRR PLLGVSLLAG LAPVGAVAAA
PLVGGLISQP HKNNQMFTTG FAPTEGGQKV RLVREDGRPI RPADISTGGQ ITVFPGIEHG
VSNQYADSPA LLIHLRDADA QEAREANVRI GHDDYMWGNF AAYSKICTHA GCPASLYEQQ
TNRLLCPCHQ SQFLITDNAK PIFGPASRRL PQLPIVVDDE GYFVATSDYT ETVGPDFWER
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