Gene Strop_3291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3291 
Symbol 
ID5059756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp3776554 
End bp3777228 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID640475539 
Producthypothetical protein 
Protein accessionYP_001160103 
Protein GI145595806 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.743277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGAT TCAAACGCCT GGGCCTGCTG GCCGCGCTGG TGCTGGTGGG TATCGCACCC 
GCCGCGGCTG CCCAGGCCGC GGCGCAGCCT TCACAGCAGG ACACGCAGTA CCTACAGGCC 
ATCCACCAGG TGAATCTGTT CGAGATCAGC AAGGGGGAGA TGGCCGGGCA GAAGGCCCAG 
GACCAGGGGG TCAAGAATCT GGGCCAGCAG ATCGGGACTG ACCACACCCA ACTGGACGAG 
ACGGTCCAAC AGGTCGCCAA CCAGCTCGGC GTCGAGCTGT CGAACGAGCC GACGGCGGAC 
CAGCAGGACG CCATGGACCA GATGAACAAC GCCAGTGGCG AGGAATTCGA CCAGCTCTGG 
GTGACCAGTA ACCTGACCGG CCACGTCCAG GCCATCCAGG CCACCCAGAC AGAGATCTCG 
CAGGGTTCTG ACTCGTCGGT GATCGAGCTT GCGCAGACCG CGCTGCCGAC CCTGCAGACC 
CACTACGACG AGTTGGTCGA GCTGGCCAAC CAACTGGGTG TCCCAGTCCC ACAGAGCAGC 
GGCACCGGCA CCCCGAGCCC GGGTATGACC ACTCCGGGCC CCGGTGCCAC CACCGAGAGC 
CCGGCTCCGG GTAGCACCAC CGAGTCACCG GCTCCGGGCG GCGGCACTGA AACCCCGGCT 
CCGGGCATGA GTTGA
 
Protein sequence
MLGFKRLGLL AALVLVGIAP AAAAQAAAQP SQQDTQYLQA IHQVNLFEIS KGEMAGQKAQ 
DQGVKNLGQQ IGTDHTQLDE TVQQVANQLG VELSNEPTAD QQDAMDQMNN ASGEEFDQLW 
VTSNLTGHVQ AIQATQTEIS QGSDSSVIEL AQTALPTLQT HYDELVELAN QLGVPVPQSS 
GTGTPSPGMT TPGPGATTES PAPGSTTESP APGGGTETPA PGMS