| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3287 |
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| Symbol | |
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| ID | 5059752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3772895 |
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| End bp | 3774682 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475535 |
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| Product | GTP diphosphokinase |
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| Protein accession | YP_001160099 |
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| Protein GI | 145595802 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.929061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGTCG ACGCCGGACA CGGCGCCGCC TTGGAGGGCG CGCTTCCGCC CCAGCCGGCT
GATCTGCCGC TGACCCGCCG GCTGCGGACG CTGCTGGCGT GGTCCACCAC CGACAGCGAC
CCCGTTGGTG AGCTGGTCCG CACGCATCGG AACGTCCACT CCGGAACAGA CCCGTCGATG
CTACGTCGGG CGTACACGAT CGCCGAGACG ATGCACCGCG GGCAGTTCCG CAAGAGTGGC
GAACCCTACA TCACCCACCC ACTCGCGGTC GCCCAGATCT GCGCCGGTCT CGGCATGGAC
GCGACCACCC TGGTCGCGGC GCTGCTACAC GACACCGTCG AGGACACCCG CTACACCCTC
CAGGCCCTCG CCGACGACTT CGGTCCCGAG GTCGCTCACC TGGTCGACGG AGTGACCAAG
TTCGACAAGG CGTTCTACGG TAAGGCCGCC GAGGCCGAGA CGATCCGAAA GATGATCATC
GCGGCCGGCA AGGACGTCCG GGTGTTGATT ATCAAACTGG CGGACCGGCT GCACAACATG
CGCACGCTCG GGGTTCGCTC CGCCGCGTCC CGGGAACGCA TCGCCCGCAA GACCCAGGAG
GTACTCGTTC CGCTCTGCGA CCGGCTGGGC ATCCAGAAGC TCAAGCGAGA ACTGGATGAC
ATGGTGCTGA TGCACCTGAA GCCGGAAGAG CACGACCGCA TCTCCCGGCA CCTGCACGAC
CGGCCCGGCT GGGACGCGTA CCTGGCGGAG GTCGTGTCCC GGGCGAAGAC GGCGCTACGC
CGCAGCCGCG TCGACGCCGT GGTGGCCCCC CGTCCGCGCC ACCTTTACTC GATCTGGAAG
GACACCCTGG CCGGCGACCA CGCCAACCCG TTTGACCTGC CCCGGGTCGT AGTTGTCGTG
AACGGCCCGG CCACCGACTG CTACGCAGCT CTGGGCGCCG TCCACGGCAC GTGGCCCCCG
GTGCCAGGCC GGTTCAAGGA CTACATCGCC TCTCCCAAGA ACAACCTCTA CCGCTCCCTC
CACACCAGCG TCCGCGGGCC GAGAGATCGC ACGGTGGAGG TGCTGATCCG CACCGAGGAG
ATGCACCGCT GCGCGGAGTA CGGCATCGCC GCCAGCTATC GCTTTGCCCA TGCCCGCGTG
GACCAGGCCG TCCGGGACGA ACACCTGGAC TGGCTGCGAC GCGTGCTGGA CTGGGAACAG
GAGACCGCCG ATCCGGCGCA GTTCCTGGAG TCGCTGCGCT GCGACCTCGC CGAGGCGCAG
ATCCAGGTCT TCGCTGACGG GCAACAGGTG GTGCTGCCGG CCGGGGCCAC CCCGGTCGAT
CTCGCGTACG AACTCGGCAC CGAGCGCGGC GACCACTGCC TGGCGACCCG GATCAACGGT
CGACTCGCCC CGCTCTCCTC CTGCCTTGAG GAAGGCGATG TCGTGGAGAT CTTCACCGAG
ACCGAGCAGA CGCCCGGCGA CTTCGACGCG GCTCCGCGCG GTCCCCGCCG GGAATGGCTC
GGCTTCGTCA AGTCCCCACA AGCCCAGATG CAGATCAACC GATGGTTCGC CGACCACACC
GAACCCGGAA TCTCCATCGC CGACAAGGTC CGCCTCGGCC GGGCCGCCGT CGGGCTGGCC
CTACGCAAGC ACGACCGCGG CCTCGCCAGC GACCTGCCCC TACTCCGACT CTCCGAGGAA
CTCGGCTACC CCGACCTGGA GACGATGCTC GTCGCGGTCT TCGACCGGGC GATCGAACCA
GACACGGTGG TCAAGCAGCT CATCGACCTG GTTGATCATC GACGGTGA
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| Protein sequence | MDVDAGHGAA LEGALPPQPA DLPLTRRLRT LLAWSTTDSD PVGELVRTHR NVHSGTDPSM
LRRAYTIAET MHRGQFRKSG EPYITHPLAV AQICAGLGMD ATTLVAALLH DTVEDTRYTL
QALADDFGPE VAHLVDGVTK FDKAFYGKAA EAETIRKMII AAGKDVRVLI IKLADRLHNM
RTLGVRSAAS RERIARKTQE VLVPLCDRLG IQKLKRELDD MVLMHLKPEE HDRISRHLHD
RPGWDAYLAE VVSRAKTALR RSRVDAVVAP RPRHLYSIWK DTLAGDHANP FDLPRVVVVV
NGPATDCYAA LGAVHGTWPP VPGRFKDYIA SPKNNLYRSL HTSVRGPRDR TVEVLIRTEE
MHRCAEYGIA ASYRFAHARV DQAVRDEHLD WLRRVLDWEQ ETADPAQFLE SLRCDLAEAQ
IQVFADGQQV VLPAGATPVD LAYELGTERG DHCLATRING RLAPLSSCLE EGDVVEIFTE
TEQTPGDFDA APRGPRREWL GFVKSPQAQM QINRWFADHT EPGISIADKV RLGRAAVGLA
LRKHDRGLAS DLPLLRLSEE LGYPDLETML VAVFDRAIEP DTVVKQLIDL VDHRR
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