| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3281 |
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| Symbol | |
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| ID | 5059746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3764386 |
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| End bp | 3766143 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475529 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001160093 |
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| Protein GI | 145595796 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAGCC CAGCCACCGC GACTCAGCCG AGCGGCGCCA GTTCCGGCAT CGAGGCCTTC
ACTCAGGAAT GGGCGAACGC GATCGCCGGG ACGAGCTACC TGCCGATGAC CCAGGCACAG
CTCAAAAAGC TACTCAACCG CCTCGCCCGG CAGCTGGCAG CGGCCCTACT CGCCGAGCCG
TTCGACCTAC GAGCCGGTCA GCGCGTCGGC ACCGAACTGG TGGCCGCACA CATCGCCTCG
GCCGAGGCAC TGGGGCGGAC TGTTGAGGTC GTTCAGCTCC GCCTGGTACG CGATCTGGGC
TTGGTCACCG AGGACGTGGC AGACCGGCTG GCCCGGCTGC TCGCCGCCGT GACCACCGGA
TACACCCGGG CGCTACGCGA CCGCACGCTG GACGAGCAGG AGTCGATCCG GCGGGCCGCG
TTGGCGCAGC GGACGAAGGC CGAACGGGCG CTCCGGGCCA GTGAGGCCCG CTTTCGGCAC
CAGGCCACCC ACGACTCGCT CACCGACCTA CCAAACCGGA ATCTCTTCAC CGAGCGGCTC
ACCGCGGCGC TAGCGGCGCC GCAGCGGGAC ACGGACCGGG TCGGCCTCTG CTTTCTCGAC
CTGGACCAGT TCAAGCGGGT CAACGACCAG TACGGGCACC AGACCGGTGA CAGGGTGCTC
ACTGACGTGG CCAACCGGTT GCGGCAGGCC CTCACCGGAC ATCTGGTCGC CCGGCTCGGC
GGCGACGCGT TCGTCATCCT GATCGAACGC ACCGGCGGTA CCCGGGACGT GATCGCGGTG
GCGGAGGCGG CCCTGGCTGC CGTACACGAA CCAGCCACGG TGGCGGGCCA CGAGGTGACG
GTGCGGACCA GCATCGGCAT CGCGGAGCGG CAGGTCGCAG ACGCCTCCGC GAACGAACTG
ATGCGGGCCG CCGACTGCAC CCTGCACTGG GCCAAGGCGG CCGGCGGCGG TCAGTGGATG
CTCTACGACG CCGAGCGCGA CCGCCGAGAG CTGACCCGCC AGGCACTGAC CGCGGCGATC
CCGGCCGGGC TGGACCGGGG CGAGTTCTAC CTCGACTATC AACCACTTAC CTCACTGCGC
GACGGCCGCC TGCTGGGCGT GGAGGCATTG GTGCGCTGGC GGCACCCGGA GCTGGGTGTT
CTGCGCCCGG GCCGGTTCAT CGGCCTCGCC GAGGAGACCG GATTGATCGT CCCGCTCGGT
GGGTGGGTGC TCGCCGAAGC CTGCCGAACA GCGGGAAGCT GGTCGGTGAC CGGCGGGACA
CCGTTTGTCA GCGTCAACCT GGCCGTCCGG CAGGTACACC GACCGGGTCT GGTGCAGGAG
GTCCGAACCC TGCTGCGGCA CACCGGGCTG CCGCCGGAAC GCCTCCAGCT GGAGATTACC
GAGAGCGCCA TGATGAGCCC CGCCGACGAA CCGGTGCGGG CGCTGCGCCA CCTCGCCGAC
CTCGGTGTCC GCATCGCCAT CGACGACTTC GGCACCGGCT ACAGCAACCT GGCGTACCTG
CGCGACTTAC CGGTAACCGA GTTGAAGGTG GCCGGGGAGT TCGTTGCCGG GCTGCGCACC
CAGGAACCCC AGGCAGACGA ACGGATCGTC GCGTCGTTGG TTTCGCTGGC CCACGCCCTG
GACCTGACCG TCACCGCCGA GGGAGTGGAG ACGGCCGGGC AGGCCGAACG GTTGCGGGCC
ATCGGCTGTG ACGCCGCCCA GGGCTGGCAC TTCGGCCGTC CAGAACCCGC TGACCGGATC
CTGGCCCGAC TGGGCTGA
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| Protein sequence | MASPATATQP SGASSGIEAF TQEWANAIAG TSYLPMTQAQ LKKLLNRLAR QLAAALLAEP
FDLRAGQRVG TELVAAHIAS AEALGRTVEV VQLRLVRDLG LVTEDVADRL ARLLAAVTTG
YTRALRDRTL DEQESIRRAA LAQRTKAERA LRASEARFRH QATHDSLTDL PNRNLFTERL
TAALAAPQRD TDRVGLCFLD LDQFKRVNDQ YGHQTGDRVL TDVANRLRQA LTGHLVARLG
GDAFVILIER TGGTRDVIAV AEAALAAVHE PATVAGHEVT VRTSIGIAER QVADASANEL
MRAADCTLHW AKAAGGGQWM LYDAERDRRE LTRQALTAAI PAGLDRGEFY LDYQPLTSLR
DGRLLGVEAL VRWRHPELGV LRPGRFIGLA EETGLIVPLG GWVLAEACRT AGSWSVTGGT
PFVSVNLAVR QVHRPGLVQE VRTLLRHTGL PPERLQLEIT ESAMMSPADE PVRALRHLAD
LGVRIAIDDF GTGYSNLAYL RDLPVTELKV AGEFVAGLRT QEPQADERIV ASLVSLAHAL
DLTVTAEGVE TAGQAERLRA IGCDAAQGWH FGRPEPADRI LARLG
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