Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3274 |
Symbol | |
ID | 5059739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3757024 |
End bp | 3757971 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475522 |
Product | ROK family glucokinase |
Protein accession | YP_001160086 |
Protein GI | 145595789 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.769765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCTGA CCATCGGAGT GGACGTCGGT GGCACGAAGG TCGCGGCCGG CGTCGTGGAC GACACGGGCA CGGTGCTCGT GCAGACCCGA CGGGACACTC CCGCGGATGA TGTCGGCAAG ACCTGCGACG TCATCGTCGA GGTGATCCGA GAGCTTGCCG AGGGCCGGGC GATCGAGGGA GTCGGCATCG GGGCGGCCGG CTGGATCGAC GCCAGTCGCT CAACCGTACT CTTCGCCCCG AACCTCGCCT GGCGTGACGA GCCGCTGCGC GAGTTCGTCA GCGGAGCCAC CGACCTGCCG GTGATCGTGG AGAACGACGC CAACGTGGCG GCCTGGGCGG AGTTCCGCTA CGGCGCGGCC TGCGACGCCG AGGACTCGAT GGTCATGTTC ACCATCGGCA CCGGGGTCGG TGGTGGCATC GTGCTCGGCG GCGAGCTGGT ACGTGGCGCG CACGGCATCG CCGCCGAACT GGGACACATG CTCTCCGTGC CGGACGGGCA CCAGTGCGGC TGCGGCCGGT TGGGCTGCAT CGAGCAGTAC GCCAGCGGGA GCGCTCTGGT GCGGCTCGCC CGAGCCGCAG CCCGCCAGGA ACCGCACCGC GCCACCGCCC TTCTGAAGTG TGCCGGCGGC GACGTTGACG CGATAACCGG CCGGATGGTC ACCGCCGCGG CGCAGGACGG CGACCCGGTC TCCACCGAGG CGTTCGCCCA GGTCGGCCAC TGGCTCGGCA GCGGCCTCGC CGACATGGCG CAGATCCTGG ACCCGCAGGT GTTGGTGGTC GGCGGTGGCG TCGTCGAAGC CGGTGACCTG CTGCTGGGAC CGGCCCGCAC CTCCTTCACC GCGGCGCTCG CGCAGCGGGG TCGGCTGCCG GTGGCGCAGA TCTGCCCCGC CAAACTCGGC AACAACGCCG GTCTCATCGG CGCCTCCGAC CTCGCCCGTC GGATCTAG
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Protein sequence | MTLTIGVDVG GTKVAAGVVD DTGTVLVQTR RDTPADDVGK TCDVIVEVIR ELAEGRAIEG VGIGAAGWID ASRSTVLFAP NLAWRDEPLR EFVSGATDLP VIVENDANVA AWAEFRYGAA CDAEDSMVMF TIGTGVGGGI VLGGELVRGA HGIAAELGHM LSVPDGHQCG CGRLGCIEQY ASGSALVRLA RAAARQEPHR ATALLKCAGG DVDAITGRMV TAAAQDGDPV STEAFAQVGH WLGSGLADMA QILDPQVLVV GGGVVEAGDL LLGPARTSFT AALAQRGRLP VAQICPAKLG NNAGLIGASD LARRI
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