| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3271 |
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| Symbol | |
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| ID | 5059736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3752911 |
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| End bp | 3754329 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475519 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001160083 |
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| Protein GI | 145595786 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.671268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACAGA GTTCCCTGGT GGTGGTCGCC AACCGCCTCC CCATCGACGA CAGTACGACG
CCCGACGGTG CCTGCGAATG GCGTCGCAGC CCCGGTGGCC TGGTGAGCGC CCTGCACTCG
CCGCTACGGC AGACACCCGC CACCTGGGTG GGGTGGGCGG GTGGCACCGG GCCCGCCCCG
GCGCTGCCGG ACGTTGACGG TGTCCGCATG CACACGGTGC CGCTCACCGC CGACGACCTG
CGCGACCACT ACGAGGGCTT CGCCAACGCC ACGCTCTGGC CGCTCTACCA CGACGCCGTC
GAACAGCCGG AACACCACCG CCGCTGGTGG GAGGCGTACC AGCGAGTAAA TCAACGGTTC
GCGGCGGCCG CCGCCGAGGT GGCCGAACCC GGTGCCGTGG TCTGGGTGCA GGACTACCAT
CTACAACTCG TACCCGGCCT GCTTCGGGCG CTCCGCCCGG ACCTGCGAAT CGGCTTCTTC
CTCCACGTGG CGTTCCCACC GCCCGAGCTG TTCATGCAGC TCCCCCGGCG AGCCGAGCTG
CTGCGCGGCA TGCTCGGCGC CGACCTTGTC GGCTTCCAGC GGGCCCAGGC AGCGCACAAC
TTCGCCCAGC TCGCCGACCG GGTGCTCGGG CTGCCCGCCA CCGACCACCG AATCGCCGTT
GACGGCCGGA TCGTGCGCGT CGGTTCGTTC CCGGTCTCCA TCGACACCAC CGAGATGACC
GCCCTGGTCG AACGGCCCGA CGTCGCCGAC CGGGCCAGCC GGCTCCGCCG TGACCTGGGC
AGCCCGGAAC ACGTGATCCT CAGCGTCGAC CGAATGGACT ACACCAAGGG CATCGAGCAG
CGGCTGAAGG CGTACAGCGA GCTGATCGCC GACGGACACG TCAAGGTACG GGACACCGTC
CTGGTCCAGG TGGCGGTGCC CAGCCGCGAG CGGGTGGGGC AGTACCAGAT CCTCCGCGAG
CGGGTGGAGC GCGAGGTCGG CCGGATCAAC GGCGAGTTCG GCCGCGTCGG CGAGCCGGCC
ATCCACTACC TGACCCAGCC CTTCGACCGC GCCGAGTTGG CCGCGCTCTA CCGGATCGCG
GATGTGATGG CGGTAACCCC GCTCCGGGAC GGCATGAACC TGGTCGCCAA AGAGTACGTA
GCCGCCCGGG TGGACGACAC CGGTGCGCTA CTGCTCAGTG AGTTCGCCGG TGCCGCCGCC
GAACTACCCC AGGCATACCT GGTGAACCCA CACGACCTGG AAGGCCTCAA GCAGGGCCTG
CTTGCGGCGC TGCGGGCTCG GCCGGAGCAG GTCCGCGAGC GGATGCAGGC CATGCGGACA
CACCTGCGCC AACACGACAT CCACGCCTGG GCTCGCTCCT ACCTGTCCGC TCTCGACCAG
GACAGCACCC TGCTCAGCCG ACTCGGTACG ACCCCCTGA
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| Protein sequence | MRQSSLVVVA NRLPIDDSTT PDGACEWRRS PGGLVSALHS PLRQTPATWV GWAGGTGPAP
ALPDVDGVRM HTVPLTADDL RDHYEGFANA TLWPLYHDAV EQPEHHRRWW EAYQRVNQRF
AAAAAEVAEP GAVVWVQDYH LQLVPGLLRA LRPDLRIGFF LHVAFPPPEL FMQLPRRAEL
LRGMLGADLV GFQRAQAAHN FAQLADRVLG LPATDHRIAV DGRIVRVGSF PVSIDTTEMT
ALVERPDVAD RASRLRRDLG SPEHVILSVD RMDYTKGIEQ RLKAYSELIA DGHVKVRDTV
LVQVAVPSRE RVGQYQILRE RVEREVGRIN GEFGRVGEPA IHYLTQPFDR AELAALYRIA
DVMAVTPLRD GMNLVAKEYV AARVDDTGAL LLSEFAGAAA ELPQAYLVNP HDLEGLKQGL
LAALRARPEQ VRERMQAMRT HLRQHDIHAW ARSYLSALDQ DSTLLSRLGT TP
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