Gene Strop_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3261 
Symbol 
ID5059726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3739027 
End bp3740304 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID640475509 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_001160073 
Protein GI145595776 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.522006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.608155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA GTCTCTCCAG CCGGCAGTCG ACGCCACCCG GCCAGACCCC GGACACCGCC 
CATCAGCGTC TCCTCGCCAA CCAGCGCGGC GCGCTGCTGC GCGCCGCCCG CACCTCGGTC
CGGCCCGAGG GAGGGTTCTG GTGGTTGGGT GAACGTGGCG AACCCGACCC GCGCGAGCCA
CTGCACACCT GGATCGCCTG TCGGATGACC CACGTCTTCG CCCTCGCCCA CCTGCAACAG
GTCCCCGACA CCGCCGACGC GGTTGACCAT GGTGTCGCCA CGCTGCGCGG CACCCTGCGG
GACGCGCAGT ACGGTGGCTG GTTCAGCGCC GTGGAGCTGG GTGGGAAGCC AGTCACCGAC
CGGAAGTCCG CGTACGAACA CGCCTTTGTC CTACTGGCCG CGAGCAGCGC GACACGCGCC
GGTCGGCCCG GAGCCGACCA GCTCCTCAAC GAGGCGATCG AGGTGGTGGG CGACCGGTTC
TGGGACGAGA ACGCCGGTCG GACCCGGGAG TCCTGGAGCC GGGACTGGTC CGAACTGGAG
CCTTACCGTG GTGCGAACAG CAGCATGCAC ATGGTCGAGG CGTTCCTGGC TGTCGGTGAG
GTCACCGGGG ACCGTCGCTG GGGGCAACGC GCGCTGGCGA TCTGCGAGCA CCTGGTGCAC
GATGTGGCCG CCCGACAGGA CTGGCGGCTG CCCGAGCACT TCACCGCCGA CTGGGAAGCG
CAGCTGGACT ACAACCTCGA CCAGCCCGCG GACCCCTTCC GGCCGTACGG GTCGACGGTC
GGCCACTGGT TGGAGTGGGC GCGGCTGCTG CTGCACCTCG AGACGGCGCT CGTAGCGCCA
CCCCGTTGGC TCCTCGATGA CGCACGTGCG CTGTTCACCG CGGCGGTCAC CCGTGGTTGG
TCGGTTGACG GGGCGGATGG TTTTGTCTAC ACCCTCGACT GGTCGGACCA GCCGGTGGTG
CGATCCCGGA TGCACTGGGT ACTGGCTGAG GCGATCGGGG CGGCAGCAAC GCTGTGGCGG
CGCACCGGCG ACCGCTCCTA CGAGCACTGG CACCAGGTCT TCTGGGACTA CGCTGTCTGT
CACCTCATCG ATGGGAAGAC TGGACAGTGG CACCACGAGC TGGACGAGAG GAATCAGCCG
GCGAACCGGG TCTGGCACGG CCGCCCCGAC GTTTACCACG CATACCAGGC CGTGCTGCTG
TCCCAGTCAC CGATCAAGCC GAGCCTTGCC GGTCTGTACG CTCCCGTGGG GACGGATCAG
GTGGAGGTGA GCCGGTGA
 
Protein sequence
MTESLSSRQS TPPGQTPDTA HQRLLANQRG ALLRAARTSV RPEGGFWWLG ERGEPDPREP 
LHTWIACRMT HVFALAHLQQ VPDTADAVDH GVATLRGTLR DAQYGGWFSA VELGGKPVTD
RKSAYEHAFV LLAASSATRA GRPGADQLLN EAIEVVGDRF WDENAGRTRE SWSRDWSELE
PYRGANSSMH MVEAFLAVGE VTGDRRWGQR ALAICEHLVH DVAARQDWRL PEHFTADWEA
QLDYNLDQPA DPFRPYGSTV GHWLEWARLL LHLETALVAP PRWLLDDARA LFTAAVTRGW
SVDGADGFVY TLDWSDQPVV RSRMHWVLAE AIGAAATLWR RTGDRSYEHW HQVFWDYAVC
HLIDGKTGQW HHELDERNQP ANRVWHGRPD VYHAYQAVLL SQSPIKPSLA GLYAPVGTDQ
VEVSR