Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3259 |
Symbol | |
ID | 5059724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3736972 |
End bp | 3737988 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640475507 |
Product | alanine racemase |
Protein accession | YP_001160071 |
Protein GI | 145595774 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.884845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.842339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATC ACCCGGCCAA ACCGCCCCAG CCTCGACGGC CCACGATGGT GGATGTCGCG CGGCGTGCCG GTGTGAGTCT CAAGACCGTA TCCCGGGTGG TCAACAACGA ACCAGCCGTC GGCCCTGAAC TTGCCGGGCG AGTAATGACT GCCATCTCCG AGTTGGGCTT CCGGCGCAAC GGCATCGCCC GAAATCTCCG ATCCCGGCAG GTCAGTGCGA CTATCGGCCT ACTCATCGAA GAAATCGCCA ACCCGTTCTA CGCGACGATC GCGGGTGTCG CAGCGGAGAT CGCCGCGGCG CACCAGACAC TGCTGATCAC CGCCTCCTCG GAGGAGGATC CGGACCGCGA ACGCACGCTG TTGCTGGAGA TGGTCCAGCG CCGGGTGGAC GGCCTGCTCG TGGTTCCCGC CGGAACGGAT CACTCCTTTC TTCGGCGGGA GGTGGAAATG GGTCTTCCGG CGGTGTTTCT CGACCGACCG CCCGGGCAAC TCCTCGCCGA TGTGGTCCTT CTGGACAACC AGGGCGGAAG TCGCACCGGA ATCCGCTCAC TACTGGACGC GGGGCACCGA CGGATCGGCA TTTTGTTGGG TTCCTTGAAC GTATACACAA TGCGTGAGCG ACTGACCGGT ATACAGGCCG AGCTATCGGG TTCCGGAATC CCGTACGACG AGGCGTTGGT GCGAAATGGG ATAGAGGGCC CCGAGCAGGC CAGCCGGGCG GTCGCGGACA TGTTCGGTCT CGCTGACCGG CCCACCGCAT TCTTCTGCGC CAACAACCGG CTCACCCTCG GCGCGCTCCA GGAGCTTCAT CGCCAGGACA GCGACGCGGC GTTGGTCGGT TTCGACGACT TTGAACTGTC CCATCTGATG CCCCGACCGT TGACCGTTAT CGCCTACGAC CAACGCGAAC TGGCCCGGAT CGCGACAGAG CAACTGTTCA GACGCATCGG CGGGGACCGG TCGTGGCCGT CGACCTCGGT CCTGCCGACA CAGCTGGTTC ACCGGGGCCT GAGCTGA
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Protein sequence | MLHHPAKPPQ PRRPTMVDVA RRAGVSLKTV SRVVNNEPAV GPELAGRVMT AISELGFRRN GIARNLRSRQ VSATIGLLIE EIANPFYATI AGVAAEIAAA HQTLLITASS EEDPDRERTL LLEMVQRRVD GLLVVPAGTD HSFLRREVEM GLPAVFLDRP PGQLLADVVL LDNQGGSRTG IRSLLDAGHR RIGILLGSLN VYTMRERLTG IQAELSGSGI PYDEALVRNG IEGPEQASRA VADMFGLADR PTAFFCANNR LTLGALQELH RQDSDAALVG FDDFELSHLM PRPLTVIAYD QRELARIATE QLFRRIGGDR SWPSTSVLPT QLVHRGLS
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