Gene Strop_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3259 
Symbol 
ID5059724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3736972 
End bp3737988 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content64% 
IMG OID640475507 
Productalanine racemase 
Protein accessionYP_001160071 
Protein GI145595774 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.884845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.842339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCATC ACCCGGCCAA ACCGCCCCAG CCTCGACGGC CCACGATGGT GGATGTCGCG 
CGGCGTGCCG GTGTGAGTCT CAAGACCGTA TCCCGGGTGG TCAACAACGA ACCAGCCGTC
GGCCCTGAAC TTGCCGGGCG AGTAATGACT GCCATCTCCG AGTTGGGCTT CCGGCGCAAC
GGCATCGCCC GAAATCTCCG ATCCCGGCAG GTCAGTGCGA CTATCGGCCT ACTCATCGAA
GAAATCGCCA ACCCGTTCTA CGCGACGATC GCGGGTGTCG CAGCGGAGAT CGCCGCGGCG
CACCAGACAC TGCTGATCAC CGCCTCCTCG GAGGAGGATC CGGACCGCGA ACGCACGCTG
TTGCTGGAGA TGGTCCAGCG CCGGGTGGAC GGCCTGCTCG TGGTTCCCGC CGGAACGGAT
CACTCCTTTC TTCGGCGGGA GGTGGAAATG GGTCTTCCGG CGGTGTTTCT CGACCGACCG
CCCGGGCAAC TCCTCGCCGA TGTGGTCCTT CTGGACAACC AGGGCGGAAG TCGCACCGGA
ATCCGCTCAC TACTGGACGC GGGGCACCGA CGGATCGGCA TTTTGTTGGG TTCCTTGAAC
GTATACACAA TGCGTGAGCG ACTGACCGGT ATACAGGCCG AGCTATCGGG TTCCGGAATC
CCGTACGACG AGGCGTTGGT GCGAAATGGG ATAGAGGGCC CCGAGCAGGC CAGCCGGGCG
GTCGCGGACA TGTTCGGTCT CGCTGACCGG CCCACCGCAT TCTTCTGCGC CAACAACCGG
CTCACCCTCG GCGCGCTCCA GGAGCTTCAT CGCCAGGACA GCGACGCGGC GTTGGTCGGT
TTCGACGACT TTGAACTGTC CCATCTGATG CCCCGACCGT TGACCGTTAT CGCCTACGAC
CAACGCGAAC TGGCCCGGAT CGCGACAGAG CAACTGTTCA GACGCATCGG CGGGGACCGG
TCGTGGCCGT CGACCTCGGT CCTGCCGACA CAGCTGGTTC ACCGGGGCCT GAGCTGA
 
Protein sequence
MLHHPAKPPQ PRRPTMVDVA RRAGVSLKTV SRVVNNEPAV GPELAGRVMT AISELGFRRN 
GIARNLRSRQ VSATIGLLIE EIANPFYATI AGVAAEIAAA HQTLLITASS EEDPDRERTL
LLEMVQRRVD GLLVVPAGTD HSFLRREVEM GLPAVFLDRP PGQLLADVVL LDNQGGSRTG
IRSLLDAGHR RIGILLGSLN VYTMRERLTG IQAELSGSGI PYDEALVRNG IEGPEQASRA
VADMFGLADR PTAFFCANNR LTLGALQELH RQDSDAALVG FDDFELSHLM PRPLTVIAYD
QRELARIATE QLFRRIGGDR SWPSTSVLPT QLVHRGLS