| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3258 |
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| Symbol | |
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| ID | 5059723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3734773 |
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| End bp | 3736395 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640475506 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001160070 |
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| Protein GI | 145595773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.260959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.616625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAT CACTTCGCCG GGCTCTCTGG GCCGGTGTCG TAGCCGTGCT GGCTGTCGCT
ACTGTGCCGA TGGCCTCGGC GTACGGGGCC GGCAGTGTCA CCGCCACATT CGACAAGGTG
CAGGACTGGG GGGCTGGCCA CGGGGCGAAG GTGACGGTCA CCAATGGCTC GAATGAGTCA
GTGAGTACCT GGCGGATCGA GTTCGATCTT CCTGCCGGGA CCAGCATCGG TGTTTTCTGG
GATGCCGACG TCACCCGAAC CGGGAACCAC TACGTCGCGG TCAAGAAGAG TTGGGCCGGG
CCGCTCGCTC CGGGTGCCAG CTTCAGTTGG GGGTACAACG GGACCGGCCC CTACCAGGCG
CCACTGAACT GCACCATCAA CGGTGCTGCC TGCTCCGGTG GGTCCGCGCC GCCGACCACG
TCACCCCCGA CCACGTCTCC TCCGACGACT GCGCCGCCGA CCACGCCGCC CCCGACGACC
ACGCCACCGA CCACCGCACC GCCCAGTGGT GATCACAAGG TCGTTGGCTA CTTCGCACAG
TGGGGCGTCT ACGCCCGTAA CTACCACGTG AAGAACATCC ACACCAGTGG CTCGGCGGCA
AAGTTGACCC ACATTATGTA CGCGTTTGGC ACCACAAGTG GTGGGCGCTG CGGGATCGGC
GACAGCTACG CCGACTACGA GAAGGCGTAC ACCGCGGCAG ACAGCGTGGA TGGCGTCGCC
GACACCTGGG ACCAGCCGTT GCGGGGCAGC TTCAACCAGC TGCGCAAACT CAAGGCGATG
TACCCGCATC TCAAGGTGAT CTGGTCGTTC GGCGGCTGGA CCTGGTCCGG TGGGTTCACC
CAGGCGGCGC AGAACCCGGC CGCCTTCGCC GAAAGCTGTT ACAACCTGGT TGAGGATTCG
CGTTGGGCGG ACGTCTTCGA CGGCATCGAC ATCGACTGGG AGTACCCGAA CGCCTGTGGT
CTCACCTGCG ACTCCAGTGG GCCGGCCGCG TTCAAGAACG TGGTGGACGC GCTGCGTTCC
CGGTTCGGTC CATCGGCTCT GGTCACCGCC GCGATCACCG GCGACGCCAG CAACGGTGGC
CGGATCGACG CTGCCGACTA CGCGGGCGCG GCACCGAACC TTGACTGGAT CATGGCAATG
ACCTACGACT ACTTCGGCGC CTTCAGCCCG CAGGGTCCGA CCGCCCCGCA CTCGCCGCTC
TACTCGTACG CCGGCATTCC GCAACAGGGC TTCTGGTCCG ATGCAGCGAT CCAGAAGCTG
AAGAGTAAGG GTGTGGCGGC CGACAAGCTA CTGCTCGGCA TCGGCTTCTA CGGCCGAGGT
TGGACCGGAG TCACCCAGGC CGCGCCGGGT GGTACCGCCA CCGGGGCCGC TCCCGGCACC
TACGAGCCGG GCTTCGATGA CTACAAGGTC CTGAAGAACA CCTGTCCGGT AACCGGGACG
GTCGGCGGCA CGGCGTATGC CAAGTGCGGC AACAACTGGT GGAGTTACGA TACCCCGTCC
ACCATCAACG GCAAGATGAC CTACGCGAAG AACGAGGGCC TCGGTGGCGC GTTCTTCTGG
GAACTCTCCG GCGATACGAC CGACGGGGAG TTGATCAGCG CCATTGAGAG TGGTCTCGGT
TAG
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| Protein sequence | MKRSLRRALW AGVVAVLAVA TVPMASAYGA GSVTATFDKV QDWGAGHGAK VTVTNGSNES
VSTWRIEFDL PAGTSIGVFW DADVTRTGNH YVAVKKSWAG PLAPGASFSW GYNGTGPYQA
PLNCTINGAA CSGGSAPPTT SPPTTSPPTT APPTTPPPTT TPPTTAPPSG DHKVVGYFAQ
WGVYARNYHV KNIHTSGSAA KLTHIMYAFG TTSGGRCGIG DSYADYEKAY TAADSVDGVA
DTWDQPLRGS FNQLRKLKAM YPHLKVIWSF GGWTWSGGFT QAAQNPAAFA ESCYNLVEDS
RWADVFDGID IDWEYPNACG LTCDSSGPAA FKNVVDALRS RFGPSALVTA AITGDASNGG
RIDAADYAGA APNLDWIMAM TYDYFGAFSP QGPTAPHSPL YSYAGIPQQG FWSDAAIQKL
KSKGVAADKL LLGIGFYGRG WTGVTQAAPG GTATGAAPGT YEPGFDDYKV LKNTCPVTGT
VGGTAYAKCG NNWWSYDTPS TINGKMTYAK NEGLGGAFFW ELSGDTTDGE LISAIESGLG
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