Gene Strop_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3243 
Symbol 
ID5059708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3719735 
End bp3720223 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content72% 
IMG OID640475491 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001160055 
Protein GI145595758 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.156466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0643244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCAC ACCCGAAAGT ACGGGCGACG CAGGAGGCCC TGGACAGCGT TGGCGCACTC 
GACGGCTCTG GCGCACCCAG CCTCGTTCGC CTGTTGCCCG ACGCGGTCCA CACCGCCGCG
GCAGCCGCCG CCGCCCTCGG TGTCGAGGTC GGGCAGATCG CCAACTCCCT GGTCTTCGAG
ACAGCCGACG GGCCGCTGCT GGTGCTGACC TCCGGGGCGC ACCGGGTGGA CACCGTCGCC
CTCGCCGCAG CGATCGGCGT CACTCGACTT CGGCGGGCCA CGCCGGACGT CGTCCGCGAA
CACACCGGAC AGGTCATCGG TGGGGTCGCC CCGGTCGGCC ACCCGCGACC GCTGCGCACC
CTGGTGGACA CCACCCTCGA CAGGTACGAC GAGATCTGGG CCGCTGGCGG CGTACCCCGC
GCGGTCTTCT CCACCACCTA TCCGGAGCTG CTGCGGGTAA CCGGCGGCAC ACCGGCCAAG
GTGGCGTGA
 
Protein sequence
MHPHPKVRAT QEALDSVGAL DGSGAPSLVR LLPDAVHTAA AAAAALGVEV GQIANSLVFE 
TADGPLLVLT SGAHRVDTVA LAAAIGVTRL RRATPDVVRE HTGQVIGGVA PVGHPRPLRT
LVDTTLDRYD EIWAAGGVPR AVFSTTYPEL LRVTGGTPAK VA