Gene Strop_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3235 
Symbol 
ID5059700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3708722 
End bp3709117 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID640475483 
Producthypothetical protein 
Protein accessionYP_001160047 
Protein GI145595750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00764978 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCGCTCT CGGAGCACGA GCAGCGGCTG TTCGATCAGA TCGAGCGGTC GCTTGCCGAG 
GACCCCAAGT TCGCCTCGGC GGTGCGCGCC AGCGACCCGC GTTTCCACGC GCGGCGTCGT
CTGCTAGTCG CTGCCGGCGT GGTCGTTGTC GGCCTGTCCC TGCTGGTTTA TGGCGCGGTG
ATCAAGACCC CGCCGCTGGC GGTGGCGGGT TTCGTCGTCA TGTTGGCCGC GTTGGGCTTC
GGGGCGCAGT CGCATCGGCG GTCGCAGTCC CCCGACCTAC ATGTCGTGGG TGGGACGACG
ACGCGTCGCC GGCCTCGTGG GCGGTCGAGT CGTCGACCGT CAATCCTGGA CCGGATGGAG
GACCGGTGGC GGCAGCGCCC GGAGGGGCAC CGTTGA
 
Protein sequence
MPLSEHEQRL FDQIERSLAE DPKFASAVRA SDPRFHARRR LLVAAGVVVV GLSLLVYGAV 
IKTPPLAVAG FVVMLAALGF GAQSHRRSQS PDLHVVGGTT TRRRPRGRSS RRPSILDRME
DRWRQRPEGH R