Gene Strop_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3230 
Symbol 
ID5059695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3700456 
End bp3700779 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content74% 
IMG OID640475478 
ProductNADH-ubiquinone oxidoreductase, chain 4L 
Protein accessionYP_001160042 
Protein GI145595745 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.614086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.15869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC CGCTGATCGT CGGCGTGCTG GTCGCGGCCG GCGTCTTCCT CCTGCTCCGC 
CCCGGGCAGC TGCGGTTGGT GCTCGGCTTC GTGCTGCTCG GGCACGCGGT GAACGTGCTC
CTGCTGGCCG CCGGCGGGCT GCACCGGCGG GAGCCGCCGG TAGACGGCGG GGGCCCGGAG
AGCGCCGACC CGCTGCCCCA GGCCTTCATC CTGACCGCCA TTGTGATCAC CTTCGGCATC
ACCGTCTACC TGCTACGGCT GCTGCGCCGC GCCGCTCGGC GGGGGAGTCG ACCACCGGAG
ACGTGGGACG GGGGGCCGCG GTGA
 
Protein sequence
MSGPLIVGVL VAAGVFLLLR PGQLRLVLGF VLLGHAVNVL LLAAGGLHRR EPPVDGGGPE 
SADPLPQAFI LTAIVITFGI TVYLLRLLRR AARRGSRPPE TWDGGPR