Gene Strop_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3228 
Symbol 
ID5059693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3698607 
End bp3698996 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content75% 
IMG OID640475476 
Productcation antiporter 
Protein accessionYP_001160040 
Protein GI145595743 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.357833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.10226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG TGGTGCGGCG GGCCGCGGTG CGGGCGACGC GGATCGCGGG GTTCCTGGCC 
TGGTTCGCGG GTCGGCTGGT GCAGGCGAAC CTGATGGTGG CCCGGGAGAT CGTCACTCCG
GGACTGGGGC TGCAGCCCGC GGTGGTTCGG GTTCCGCTGC GTGCCCGGAC CGACACCGAG
GTGGCCCTGC TCACGCTCTT CGTCACCCTG ACCCCGGGCA CCCTCACGCT GGCGGTGCGG
CGGGACCCGC GGGTGATGTG GGTGCACGGC ATGTACGCCG CGGACGCGAC GGCCTTCCGC
CGCACCGTGG CGGAGCTGGA GGGGCGGCTG TTGGCTGCCG TCCGACCGGT CGGCGGAGGC
GGCCGGACCG CTGGCGAGGG AGGTGGGTGA
 
Protein sequence
MSGVVRRAAV RATRIAGFLA WFAGRLVQAN LMVAREIVTP GLGLQPAVVR VPLRARTDTE 
VALLTLFVTL TPGTLTLAVR RDPRVMWVHG MYAADATAFR RTVAELEGRL LAAVRPVGGG
GRTAGEGGG