| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3216 |
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| Symbol | |
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| ID | 5059681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3684084 |
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| End bp | 3685499 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640475464 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001160028 |
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| Protein GI | 145595731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0904133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGC TGAGCCTGGC CGAGGTGGCG GCAGCGGTCA ACGGCCAGTT GGTCGCCGCC
GACCCGAGCG TCGCGGTCAC CGGCTCGGTC GAGTTCGACT CCCGCAAGGT TGGCCCGGGC
GGGCTCTTCG TCGCCTTCCC CGGGGAACGG GTGGATGGCC ACGACTACGC CGAAGGGGCG
ATCCGGGCGG GTGCGGTGGC GGTGCTCGGC ACCCGGGTGG TGGCCGGCGT GCCGATGGTG
CTGGTAGACG ACGCCCAGGT GGCGCTGGGG CGACTGGCCC GCGCGGTGGT GGACCGGCTG
CCCGATCTGA CCGTCGTCGG CCTCACCGGT TCCTCCGGCA AGACCAGCAC CAAGGACGTG
ATCGCTGCCC TCACCGCTCG ACTCGGGCCG ACGGTCGCCC CGCCCGGGTC GTTCAACAAC
GAGCTGGGGC ACCCCTACAC GGCGCTCCAG GCCGATCCGG AGACCCGCTA CCTCGTGTTG
GAGAAGGGTG CCCGAGGGGT GGGGCACGTC AGCTACCTCT GCGAGGTGGT ACCGCCGCAG
ATCTCCGTGG TGCTGAACGT GGGGGTGGCC CACATCGGTG AGTTCGGTTC CCGAGAGACC
ATCGCCCTGG CGAAGGGGGA GCTGGTGGCG GCGCTGCCGG CGGAGGGGCT GGCCGTTCTC
AACGCCGACG ATGACCTTGT CGCCGCGATG GCGACGCGAA CCCGGGCGCG GGTGGTCCGG
TACGGCGAGG CGGCCGAGGC GGACGTGCGG GCCGTTGACG TGGTGCTGGA CGAGCGGGGC
CGGCCGTCGT TCACGCTGGT GACTCCGGAG GGGCGCGCGC CGGTGCGGCT CGGGCTGACC
GGCCGGCACC AGGTGTCCAA CTCGCTCGCC GCCGCCGCGG TGGCCCGGGA ACTGGGGATG
CCGGTGACCG AGCTGGCGAC CGCCCTGGGT GAGCTCGGGC TGGTCTCGAG TCGTCGGATG
GACGTCTTCG AGCGTGTTGA CGGGGTCACC GTCATCGACG ACTCGTACAA CGCCAACCCT
GCCTCGATGG CCGCTGCCCT GCGGGCGCTG GCCGGGTTCA GGCGGCGGCG CACCATCGCG
GTGCTCGGGT ACATGGCCGA ACTGGGGCCG TACGAGCAGG ACGGGCATGT CGAGGTCGGG
CGACTTGCCG CGGAACTGGG GGTGGACCGC CTGCTCGTGG TGGGCGAGGC GGCGGCCCCG
ATCCATGAGG GCGCAACATC GGTACGTGAC TGGGAAGGAG AATCGGTGCA GCTCACCGAT
CAGGCGGGCG CCGTCGAGGT GCTGCGGGGA GACCTGCGGC CCGGTGACGT CGTCCTGGTG
AAGGGCTCGC GGTACCGCAC GTGGGAGGTG GCGGACGCGC TGCGCGCCGA CGCCGTGGCC
GACCGGGGTG CGGGAGCGGA CGGTGGCCTG GCATGA
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| Protein sequence | MIPLSLAEVA AAVNGQLVAA DPSVAVTGSV EFDSRKVGPG GLFVAFPGER VDGHDYAEGA
IRAGAVAVLG TRVVAGVPMV LVDDAQVALG RLARAVVDRL PDLTVVGLTG SSGKTSTKDV
IAALTARLGP TVAPPGSFNN ELGHPYTALQ ADPETRYLVL EKGARGVGHV SYLCEVVPPQ
ISVVLNVGVA HIGEFGSRET IALAKGELVA ALPAEGLAVL NADDDLVAAM ATRTRARVVR
YGEAAEADVR AVDVVLDERG RPSFTLVTPE GRAPVRLGLT GRHQVSNSLA AAAVARELGM
PVTELATALG ELGLVSSRRM DVFERVDGVT VIDDSYNANP ASMAAALRAL AGFRRRRTIA
VLGYMAELGP YEQDGHVEVG RLAAELGVDR LLVVGEAAAP IHEGATSVRD WEGESVQLTD
QAGAVEVLRG DLRPGDVVLV KGSRYRTWEV ADALRADAVA DRGAGADGGL A
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