Gene Strop_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3200 
Symbol 
ID5059665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3668833 
End bp3670008 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID640475448 
Producthypothetical protein 
Protein accessionYP_001160012 
Protein GI145595715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.958909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.681183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTCCG GTGACCTGCT GCGTCGGCTG GACCAGCGGC TGTTACCCCA CCTTGTGGGC 
GCGGCGAACC GGCTGGCCCA GGGTCCTGCC CAACGCGGGA TTCTCCTCGC GGCTGTGCTG
CTCTCCTGCC TCGCGGTGAC GGTCACCGCG ATGTGGGGGA TTGGTGCACC GCAGGTCAGT
GCCCCCACCG CTGATGGCGT GACCCGGGTC GGGGTGGCCG CCGGGGAGTC AATTCCGGGA
TATCTGCAGG ACGCCACGGA TGACCTGGAG GCGCTGCGGG CGTCCCCGTC CCCGGAGAAC
GACACCTTCG CACTGGTCTC GCTGGCGACG TATCTGACGC CGCATCAGGC CGACAGTGTC
CTCGGTGACG TGCCGGTCGC CGCTGTCATC GGTCGGGTGC CGCTGCCTGA GCGGCAGACC
GAGGTGGTGC GGATCGACGC GCCGGGCCTG CCGGATGACG TGATCACCGC CATGGCCGAC
CTGGCGGCCC GTAAGGATCG GGAGGCGGGC GACTATCGGG CGCGGGCCGT CGCGGTCAGC
GACGGGGGAC CGGAGCAGCG CGAGCAGCGC GCGCTGTACC TCAGTGCGGC GCAGATGGCG
GAGGCCGAAG CCACGGCATA CCGCGGTGGG TGCGCCTGCG TGTACGCGGC GGTGGTTCGT
GCGGAGCCGG TCGAGCTGCG CCAGGTGGCG TCCCAACCGG ACGTGCGGGT CGTTGATCCC
GCGCCGGAGG TGCGTCAGCT GGACCGGACC GTCTTCACCC CACCCCTGCC GGAGCAGGAT
GCGGTCGCGC ACCCCCTTGC AGACCTTGAT CTGACCACCC CCGATCCGGT GATCCCCGAC
CCGGCGGTCC CGGATCCGGT GGTCCCCGAC CCGGTTGTTC CCGACCCGGC GGTCCCTGCT
CCGGTTACCC CCACCTCGGT TGCCCCTGAT CCGGTCACCC CCACCCCGGA TAGCCCTGAT
CCGGGCACCT CCGGCTCGCC GACGCCCACG CCGAGTGAGG AACCCGCTCC CGACCCGCTC
CCGGAGGTGA GGAAGTCACC ATCGACATCA TCGAGTTCCA CCTACTCGGC CGGCGAGTCA
CCCACGCCGA CGACCTCGAC GAACGCGGTC CGCACGGGTA CACCCGAGCC GGTTTCGGAA
GGTGAGGTCG GCCCGGTGGG AGGTGGATCG GTATAG
 
Protein sequence
MRSGDLLRRL DQRLLPHLVG AANRLAQGPA QRGILLAAVL LSCLAVTVTA MWGIGAPQVS 
APTADGVTRV GVAAGESIPG YLQDATDDLE ALRASPSPEN DTFALVSLAT YLTPHQADSV
LGDVPVAAVI GRVPLPERQT EVVRIDAPGL PDDVITAMAD LAARKDREAG DYRARAVAVS
DGGPEQREQR ALYLSAAQMA EAEATAYRGG CACVYAAVVR AEPVELRQVA SQPDVRVVDP
APEVRQLDRT VFTPPLPEQD AVAHPLADLD LTTPDPVIPD PAVPDPVVPD PVVPDPAVPA
PVTPTSVAPD PVTPTPDSPD PGTSGSPTPT PSEEPAPDPL PEVRKSPSTS SSSTYSAGES
PTPTTSTNAV RTGTPEPVSE GEVGPVGGGS V