| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3199 |
|---|
| Symbol | |
|---|
| ID | 5059664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3667327 |
|---|
| End bp | 3668790 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160011 |
|---|
| Protein GI | 145595714 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0455] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.499034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGG GAGGGCGAGC CGTGGAGGGC AGCGAGACCG GCTGGGGTCA GCCGGCCGAA
CCGGCACCCC GGTGGCGGGC GTTGCTCGAC CGGGCGCGGC TCGGTAGCCG TGCAGCCGAG
CCGGCCGGGT CGGACCGGTC GGGGCCTGCC GCCCCGGTCG AGCCATTGCC CCGACGAGCC
GCCGGCAACG GCTACGCGGC CCGCGTGCCG GCAACCGGGT CGCATGTGCC GGGTGTCGGC
TCGCCGCCTA CCGAGCTGTC GTATGGCGCG GAGGCGCGAA CGTACGGGGC TGATCCGCGG
GACGCCGGGG AGCGGGGTGA GCCGGCGTAC CGGGCCGAGC CGGCGTACCG GGCCGAGCCG
GCGTACCGGG CCGAGCCGGG CTACCACGCC CCACCGGCTC CTGCTCCGGA GCCCCGCTAC
TCCGAACCGG AGTCACCGCC AGCGCGGTCC CGCTACGCCT TACTCGACAA TGGTTACCGG
CACGCGCCGC CGTCCGAGAA CGGCTACCGG TCTGATACGG CGTATCGGTC AGATCCGGGG
TACCAGGCTG ATCCTGGATA TCGGTCGGAG AACGACTACT ACCCTGAGCC GGCGTACCAG
CCCGCGGTGA GTCGGGGCTA CGCCAGGGTG GAGTGGCGGC CGCCGTCCGC CCCGAGTGGA
TCGGAGCGCG CGGCCACCGT ACTCCGGGGG GAGCTCGGTA GCCCCCGGGT GCTGGCGTTC
GCGAATCCCA AAGGTGGCGT GCACAAAACC ACGGCGACCG TGCTGGCCGC CGCAACCGTC
GGCAGCGTGC GTGGCCGGGG CGTGCTGGCC TGGGACGACA ACGAGCTACG GGGCACGCTC
GGTCTGCGTG CGGGCAGCGC CCGGCACGCC CGTACGATCC GGCATCTGAT CAGCGACCTT
GCGCACATCG AGATCAAGGA TGGGCCGGAG TTGCTGGACC AGCTCGACGA CTATCTCCGG
CACGCCTCGG ACGGCTCGTA CGACGTGCTG GCGGGTGAGG AGAGTCCCCG TTTCGCCCAG
CGGCTCGACC AGTTCACCGT CCGGCGGGTG CTGGAGCTGC TCCGTCGCAC GCACGACGTG
ATCTGCGTGG ACACCGGCAA CAACGTGGAG AGCCCCAACT GGCGTACCGT GATGCAGGCC
GCCGACCAAC TCGTGGTCAC CACGGTGCCG CGGGAGGACG CCGCGTTCAG CGCTGACTGG
ATGCTCGACC TTCTGCACGA GGTCGGCATG GGGGAGTTGG CCGACAACGC GGTGACCCTG
ATCTCGTGTC CGACTCCCGG ACACAGTGAG CTCCGGGCCG ACCTGGAACG CCACTTCGCT
ACCCGGACTC GGGCGGTGAC CGTGGTTCCG TATGACCCGA TCTTGGAGTC CGGCTCGTCA
ATCGAGTACC ACCAGCTCCA GCCAGCGACC CGGGAGGCGT GGTTGAGTGC CACCGCGGTG
ATGCTGGAGC CGTTCGCCCG CTGA
|
|---|
| Protein sequence | MELGGRAVEG SETGWGQPAE PAPRWRALLD RARLGSRAAE PAGSDRSGPA APVEPLPRRA
AGNGYAARVP ATGSHVPGVG SPPTELSYGA EARTYGADPR DAGERGEPAY RAEPAYRAEP
AYRAEPGYHA PPAPAPEPRY SEPESPPARS RYALLDNGYR HAPPSENGYR SDTAYRSDPG
YQADPGYRSE NDYYPEPAYQ PAVSRGYARV EWRPPSAPSG SERAATVLRG ELGSPRVLAF
ANPKGGVHKT TATVLAAATV GSVRGRGVLA WDDNELRGTL GLRAGSARHA RTIRHLISDL
AHIEIKDGPE LLDQLDDYLR HASDGSYDVL AGEESPRFAQ RLDQFTVRRV LELLRRTHDV
ICVDTGNNVE SPNWRTVMQA ADQLVVTTVP REDAAFSADW MLDLLHEVGM GELADNAVTL
ISCPTPGHSE LRADLERHFA TRTRAVTVVP YDPILESGSS IEYHQLQPAT REAWLSATAV
MLEPFAR
|
|---|
| |