Gene Strop_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3197 
Symbol 
ID5059662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3665830 
End bp3666528 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content72% 
IMG OID640475445 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_001160009 
Protein GI145595712 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.643868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.437508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGC GGCTGCCGGT GTTCCCGCTC GGGACCGTTC TCTTCCCCGG TCTGGTGCTG 
CCGCTGCACA TCTTCGAGGA TCGATACCGT GCGCTGGTGC GCCACCTACT CGCCCTGCCG
GAGCAGGGGC GGCGTGAGTT CGGTGTGGTG GCGATCCGGG CCGGTTGGGA GGTCGCTCCC
ACCGCACCGG ACGGCCGCCC GTTGCCCGGC GACGACGTCA CGCTGCACGA GGTGGGCTGC
ACCGCCGAGC TGCGACAGGT GACCGAGCTG CCGGACGGGG GCTACGACAT CGTCACCGTG
GGTCGGCAGC GGTTCCGGAT GGGTGCGGTC GACCGAGCCA GCGCGCCCTA CCTGACCGCC
GAGGTCGAGT GGCTGCCCGA GCCACACACC CCAGACGAGG CTGGGGAGCT ACCCGCCCGG
GTGACCGCGG TCTTCCGGCA GTACCTGAGC CTGATCCGCG CCGACCCGGA AGAGATCTCG
GAGCAGCTCC CGGAGGATCC GACAGTCCTG TCGCACCTGG TCGCCGCGAC GACCGCGCTG
ACCCTCGCCG ACCGACAGCG GTTGCTCGCC ATCGACGGTA CCGCTACCCG GCTCCGCGCC
GAACTGCGGC TGCTCACCCG CGAGGTGGCT CTGCTGCGCC AGGTCCGGGC GGTTCCGGTG
CCGCTGAAGG AGTTGGCGTC TCCGCCGACG CCCAACTGA
 
Protein sequence
MTARLPVFPL GTVLFPGLVL PLHIFEDRYR ALVRHLLALP EQGRREFGVV AIRAGWEVAP 
TAPDGRPLPG DDVTLHEVGC TAELRQVTEL PDGGYDIVTV GRQRFRMGAV DRASAPYLTA
EVEWLPEPHT PDEAGELPAR VTAVFRQYLS LIRADPEEIS EQLPEDPTVL SHLVAATTAL
TLADRQRLLA IDGTATRLRA ELRLLTREVA LLRQVRAVPV PLKELASPPT PN