| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3180 |
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| Symbol | |
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| ID | 5059645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3649463 |
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| End bp | 3651232 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475428 |
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| Product | ABC transporter related |
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| Protein accession | YP_001159992 |
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| Protein GI | 145595695 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.370593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGG AGGCGACGGC TGAGGAGTCG ACCTGGCGGA CGCTGCGGCG GGGCTTGGCG
CTCTCTCCGG AGTTGCGGGT CGGGTTGGCG GGCACGCTCG GCCTGGCGCT GGTCTATATG
GTTGGTCGGG CGGCCGTGCC GGTGGCGGTG CAGCAGGGCA TCGACAACGG CATCGCCGGC
GGTCTCCGCC TGGATGTGGT CTGGACGGTG GTGACCGTCA CCGCGGCGGT GCTCGTGGTG
ACCACCACCT GTGGCTACCT GATGATGCGG CGGTTGTTCA CGGTCAGCGA GACCGCCCTC
TCCAACGTGC GGGTTCGCGC CTTCCGACAC GTCCACGACC TGTCGATGCT GCACCAGCAG
TCCGAACGGC GTGGGTCGTT GGTGTCCCGG GTGACCAGCG ATGTCGACCA GATCACCCAG
TTCCTCCAGT GGGGCGGTGT GATCCTGCTG ATCAACATAG GTCAGCTGGT GGTCACCACG
GCCGTCATGC TCGCGTACTC CTGGCAGCTG ACCCTGGTGG TGTACGCGGC GTTCGGCCCG
GCGGTGTTCG TGATCCGGTT GCTTCAGCGG CGGCTCGCCG GCGCGTACGG GGTGGTGCGG
CAGCGCACCG GCACGCTGCT CGGTGCGATC GCCGAGAGCG TGGTGGGCGC ACCGGTGATT
CGGGCGTACG GGATTTCCGG GCGCACCGCA CGCCGGCTCG ACGAGGCGAT CGACAACCAG
CGGCAGGCCC AGCAGCGGGC TATCCGGATC AGCATCCTGG GTAGCTCGGT CGGTGAGATC
GCCGCCGGGT TGGCGCTGGC CGGCGTGGTG GTGCTGGGCG TGCTGCTCGG CGCTGACCGT
ACGTTGAGCA TCGGTGAGGT GACCGCGTTC CTGTTCCTGG TGACCCTCTT CGTGCAGCCG
GTGCAGATCG CCACCGAGGT GCTCAACGAG GCGCAGAACG CGATCGCCGG CTGGCGACGG
GTACTCGACG TGTTGGATGT TGCGCCGGAT GTCGCGGACC CCGGCGAGTC GGGGCGGGAG
CTCCCGCCGG GTCCGTTGGA TATCCGCTTC GTCGCGGTGG GTTTTGCCTA CCCGGGCGGC
GCACCGGTGC TACACGACAT CTCGGTGGAG ATTCCGGCGA AGAGCCGGGT GGCGGTGGTC
GGCGAGACCG GCAGCGGGAA GACGACGTTC GCGAAGCTGC TCACCCGGCT GATGGATCCG
ACCGAGGGCG ACGTGCTGCT CTCCGGGATG CCGTTGCGGG AGGTGCGTTT CGGCGCGCTT
CGTTCGCGGG TGGTGATGGT CCCACAGGAC GGGTTCCTCT TCGACGCCAC CGTCGCGGAA
AATGTCCGTT TCGCCCGGCC GGATCTCACC GACGAGCAGC TCACTGCCAC CTTCGTGGAG
TTGGGGTTGG CGGACTGGCT GGACGGCCTC CCGGCGGGCC TGGACACCGC GGTGGGGGAG
CGCGGTGAGG CGTTGAGTGT GGGCGAGCGG CAGCTGGTCG CGCTCGCCCG GGCGTACGTC
GCTGACCCGG ATCTGCTGGT GCTCGACGAG GCCACCAGCG CGGTCGATCC GGCAACCGAG
CTGCGCCTGC AACGCACCCT GGACACGGTG ACCCGCGGCC GGACAACGCT CGCCATCGCG
CACCGGCTCT CCACGGCGCA GGCCGCCGAC GAGGTGATCG TGGTGGACCG AGGGCGGATC
GTGCAGCGGG GTGCGCACGA GGAGCTGGTC CGCGACGCCG AGTCGGTGTA TGGGCAGCTC
TACGCCTCGT GGCTGGAGCA GACCCGGTGA
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| Protein sequence | MAPEATAEES TWRTLRRGLA LSPELRVGLA GTLGLALVYM VGRAAVPVAV QQGIDNGIAG
GLRLDVVWTV VTVTAAVLVV TTTCGYLMMR RLFTVSETAL SNVRVRAFRH VHDLSMLHQQ
SERRGSLVSR VTSDVDQITQ FLQWGGVILL INIGQLVVTT AVMLAYSWQL TLVVYAAFGP
AVFVIRLLQR RLAGAYGVVR QRTGTLLGAI AESVVGAPVI RAYGISGRTA RRLDEAIDNQ
RQAQQRAIRI SILGSSVGEI AAGLALAGVV VLGVLLGADR TLSIGEVTAF LFLVTLFVQP
VQIATEVLNE AQNAIAGWRR VLDVLDVAPD VADPGESGRE LPPGPLDIRF VAVGFAYPGG
APVLHDISVE IPAKSRVAVV GETGSGKTTF AKLLTRLMDP TEGDVLLSGM PLREVRFGAL
RSRVVMVPQD GFLFDATVAE NVRFARPDLT DEQLTATFVE LGLADWLDGL PAGLDTAVGE
RGEALSVGER QLVALARAYV ADPDLLVLDE ATSAVDPATE LRLQRTLDTV TRGRTTLAIA
HRLSTAQAAD EVIVVDRGRI VQRGAHEELV RDAESVYGQL YASWLEQTR
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