Gene Strop_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3176 
Symbol 
ID5059641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3646770 
End bp3647210 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content72% 
IMG OID640475424 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001159988 
Protein GI145595691 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.433647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTAC CTGACGCGCC GTCGCCCGGC GCCCTGCCCG GCTCCGACCC GAGCGGCGGT 
CCGGCCCGGC CGTCCCACCT GGACCCGGCC ATCGCCGCGC GCCTGCGCCG TACGTCCGAT
GGGCTCCTCG CCGCGGTGGT CCGCCAGTAC GGCTCCACCG AGGTGTTGAT GCTCGCCTGG
ATGGACGACG AGGCGCTACA CCGGACGCTG ACCACCGGCC GGGCCACCTA CTGGTCCCGC
AGCCGCGGTG AGTACTGGGT CAAGGGCGCG ACCTCCGGAC ATCATCAGTA CGTCCGCGCC
GTCGCCCTCG ACTGTGACGG AGACGCCCTG CTGGTCGACG TCGACCAGGT CGGCCCGGCG
TGTCATACCG GTCGGCGAAC CTGCTTCCAC AACAACCTGC CGGTCACCGG CGTGTCCGGC
GAACGGCAGG CCCGGTCATG A
 
Protein sequence
MPVPDAPSPG ALPGSDPSGG PARPSHLDPA IAARLRRTSD GLLAAVVRQY GSTEVLMLAW 
MDDEALHRTL TTGRATYWSR SRGEYWVKGA TSGHHQYVRA VALDCDGDAL LVDVDQVGPA
CHTGRRTCFH NNLPVTGVSG ERQARS