| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3172 |
|---|
| Symbol | |
|---|
| ID | 5059637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3643051 |
|---|
| End bp | 3643911 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475420 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001159984 |
|---|
| Protein GI | 145595687 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.291676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCGG AGCATGCGCA CGCGGAGGGG AGCGACGCCG GTTCGGCGAA GCCCAGCGTG
CTCGATGAGA TTCTGGCCGG AGTACGCGAG GATGTGGCTC GGCGGCAGGA GCAGGTCCCG
CTGGAGCGCA TTCGAGAGCT GGCTGCCGCG GCCCCGCCAC CGCTGGACGC GTACGCGGCC
CTGCGTCGGC CCGGCGTGGC GGTGGTCGCC GAGGTGAAGC GTTCCTCGCC GTCCAAGGGG
CAGCTGGCCG AGATCGCCGA CCCGTCCGAT CTGGCCAGCG ACTACGCCGC CGGTGGTGCC
CGGGCGATCA GCGTGCTCAC CGAGGGGCGC TGGTTCGGTG GTTCGCTGGA TGATCTCGCT
GCCGTCCGTG CCGCGGTTGA TGTTCCGGTC CTGCGGAAGG ACTTCGTGGT CTCCAGCTAC
CAGGTACACG AGGCGCGGGC GCACGGCGCC GATCTGGTGC TGCTGATCGT GGCGGCGTTG
GAGCAGAAGG TGTTGGTCGG CTTGCTTGAG CGAATCGAGT CGCTGGGCAT GACCGCGTTG
GTCGAGGTGC ACGACGAGGA GGAGGCGGAC CGGGCGTTGG AGGCGGGTGC CCAGGTGATC
GGGGTCAACG CTCGCGACCT GCGTACGCTG GAGGTCGACC GTTCGGTCTT CGAACGGATC
GCGCCCGGCC TGCCCAGCAG CGTCGTCAAG ATCGCTGAGT CGGGAGTGCG CGGGCCTCAC
GACCTCATCC GGTACGCGTC GGCCGGTGCC GACGCGGTTT TGGTCGGCGA GGGCCTGGTT
ACCCAGAAGA GTCCCCGTGA GGCGGTGGCC GAGTTGGTCA ACGCCGGTAA CCACCCGGCG
ACACCCCGTC CGGTGCGCTG A
|
|---|
| Protein sequence | MTAEHAHAEG SDAGSAKPSV LDEILAGVRE DVARRQEQVP LERIRELAAA APPPLDAYAA
LRRPGVAVVA EVKRSSPSKG QLAEIADPSD LASDYAAGGA RAISVLTEGR WFGGSLDDLA
AVRAAVDVPV LRKDFVVSSY QVHEARAHGA DLVLLIVAAL EQKVLVGLLE RIESLGMTAL
VEVHDEEEAD RALEAGAQVI GVNARDLRTL EVDRSVFERI APGLPSSVVK IAESGVRGPH
DLIRYASAGA DAVLVGEGLV TQKSPREAVA ELVNAGNHPA TPRPVR
|
|---|
| |