Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3161 |
Symbol | |
ID | 5059626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3627884 |
End bp | 3628729 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475409 |
Product | lipase, class 2 |
Protein accession | YP_001159973 |
Protein GI | 145595676 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0217102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTTC GAAAGACCGC CATCGTGCTC GCGTTCGCAC TCGGCGTCAC GCTCGCCGTC CCTGGCGTCG CCGCCAGTGC AGCATCCGCC AGTGCGGCAC CTGCCGGTGC CGCGGCTGAG CCGGCGTCCA CTTCCCACGT CCCACCGAGT AGCGTCCACA ACGCCACGGC CGGCCCGGCC GTGGCGGCCG ACAACCCAGT GATCATCGTC GGCGGGTTGA GCGGCTTCGC CTTCGCGTAC GGGCCGCTCG CCGCGCGGCT GGATGCCGAC GGCTTCCGTT CCTTCGTCTA TGAACTGCCA GGGCTGGGTT TCGGCGACAT CCCGACCTCG GCCCGCGCCT TCGCCGACTA TGTCGACCAG GTTCGCGCCA CCACCGGCGC CAACCGGGTG GATCTGGTGG GGCACTCCGA GGGGGGCCTG GTGGCCCGCT ACTACCTGAA GCAACTCGGC GGCACCGGGG CCGTCGGTCG GTACGTCAGC CTCGGCAGCC CGCAGTACGG GACGTATGTG GCCAACATCG TCGCCTTCCT CGGGCTCGGT AGCTGCGCCG GGGTGGTGGC ATGCCAGCAG ATGACGATCG GCTCGGACTT CCTCGCCGAC CTCAACGCCG GTGACGACAC TCCCGGCTCG GTCAGCTACA CCACCATCCG TACGTGGCAG GACCAGTTGG TGCGGCCGGT GGGCAACGCT GCGCTGGCCG ACGGAGCGCG CAACGTGCTG ATCCAGTCCT GGTGTCCGCT GCGGCTGGTC GGGCACCTTG GGTTGGCACT GGACGGGACG ACCTACACGG TGATCCGGCA GGCGTTGCGC GACGAGTCGA TCCGCCCCAA CTGCCTGGCT GTCTAG
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Protein sequence | MLLRKTAIVL AFALGVTLAV PGVAASAASA SAAPAGAAAE PASTSHVPPS SVHNATAGPA VAADNPVIIV GGLSGFAFAY GPLAARLDAD GFRSFVYELP GLGFGDIPTS ARAFADYVDQ VRATTGANRV DLVGHSEGGL VARYYLKQLG GTGAVGRYVS LGSPQYGTYV ANIVAFLGLG SCAGVVACQQ MTIGSDFLAD LNAGDDTPGS VSYTTIRTWQ DQLVRPVGNA ALADGARNVL IQSWCPLRLV GHLGLALDGT TYTVIRQALR DESIRPNCLA V
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