Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3159 |
Symbol | |
ID | 5059624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3625123 |
End bp | 3626007 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475407 |
Product | palmitoyl-CoA hydrolase |
Protein accession | YP_001159971 |
Protein GI | 145595674 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.13568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGT CCGGTGCGGT GGTCGGTCAG GCCGCGGTCG ATCAACTGCT GGAGGTTCTG GACCTCAGCC CGACCGGTGA GCGAGCCTTC CGGGGGATGA GTCCGCAGGT CGGCCCGCAG CGGGTGTACG GGGGGCAGGT CGCCGGTCAG GCGCTGGTCG CCGCCGGGCG GACGGTCGAT CCGGAACGCT TCGTGCACTC TCTGCACGGT TACTTCGTGC GACCGGGCGA TCCGAGTGAG CCCATCGACT ACCAGGTCGA GTGCGTTCGC GACGGTCGTT CCTTCTCGGT CCGCCGGTCG GTGGCGCTCC AGCACGACAA ACCGATCTTC TTCATGTCGG CGTCCTTCCA GCGCCAGGAG GAGGGGCTGG ACCACCATGC GCCGTCCCCG CCGAACGTGC CCGGCCCGGA CGAGGTGCCG ACGATGACCG ACCGGCTCGC CCGCTACCCG GAGCGGTTGG GTATCTGGGC GCTGATTCCC CGGCCGATCG ACGTCCGCTA CGTCGGTGAG CCCGGCTGGG TGCGCCCTGG TGACCGGCCG GCCGAGCCGA ACCAGCGGGT GTGGATGCGG ATCGACGGCA AGCTCCCGGA CGACCCGCTG CTGCACGCCT GCGCCCTGAC GTACGCCTCC GATCTCACCC TGCTGGACTC GGTGCTGTCG GTACACGGAG AGGTGTGGGG GCCCGGCGGT GTGGTGGGCG CCAGCCTCGA TCACGCCCTC TGGTTCCACC GGCCGTTCCG CGCCGACGAG TGGTTTCTCT ACGACTGCTG GAGCCCCTCG GCGTCTGGGG CGCGGGGGTT GGCGGCCGGT CGCATGTTCA CCCGGGACGG CCGGCAGATC GCCAGTGCGG TGCAGGAGGG CTTGCTGCGC AGAGTTGGCG AGTGA
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Protein sequence | MSASGAVVGQ AAVDQLLEVL DLSPTGERAF RGMSPQVGPQ RVYGGQVAGQ ALVAAGRTVD PERFVHSLHG YFVRPGDPSE PIDYQVECVR DGRSFSVRRS VALQHDKPIF FMSASFQRQE EGLDHHAPSP PNVPGPDEVP TMTDRLARYP ERLGIWALIP RPIDVRYVGE PGWVRPGDRP AEPNQRVWMR IDGKLPDDPL LHACALTYAS DLTLLDSVLS VHGEVWGPGG VVGASLDHAL WFHRPFRADE WFLYDCWSPS ASGARGLAAG RMFTRDGRQI ASAVQEGLLR RVGE
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