| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3158 |
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| Symbol | |
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| ID | 5059623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3624297 |
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| End bp | 3624863 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640475406 |
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| Product | sigma-70 region 4 domain-containing protein |
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| Protein accession | YP_001159970 |
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| Protein GI | 145595673 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.579864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0761655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATGG ACCGCCTCTC CCAAGGATCG GCTCGTGTGG ACCCTTTGCT GACAGAGTTC
GAAACGTTCG TCCGGACCCG TACGCCCGCG CTTTTGCGGT CGGCCTACCT TCTGACGGGT
GACCAGCACC TTGCCGAGGA TCTCGTTCAG TCGGCCCTCG CGCGGACACA CCGGTCGTGG
AAACGGCTGC ATGAGAGTGG GAATGCCGAA GCCTACACCC GCAAGACTAT GTACCACCTC
CAAGTCTCCT GGTGGCGACG TCGACGTGTA GGCGAGTCGA TGCCGGGTGA CTTGCCTGAT
CGAAGCGACA GCAGTTCGGA TTCAGACGCC GCGCACCAGA CCATCATGCG GCTCACGTTG
CGGAACGCCT TGGCCCAGCT CTCCGCGAAG CAGCGGGCGG TGCTGGTGCT GCGCTTCTTC
GAGGACCGTA CCGAAATGGA GGCCGCCGGC CTGCTCGGCG TCACTGTCGG CACTGTCAAG
AGCCAGACCT CCAAGGCCTT GGCCAAGTTA CGCACTGTCG CACCAGAGCT CGGCGAACTG
TACGTCTCGG AAGGAAGCGC CCGATGA
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| Protein sequence | MSMDRLSQGS ARVDPLLTEF ETFVRTRTPA LLRSAYLLTG DQHLAEDLVQ SALARTHRSW
KRLHESGNAE AYTRKTMYHL QVSWWRRRRV GESMPGDLPD RSDSSSDSDA AHQTIMRLTL
RNALAQLSAK QRAVLVLRFF EDRTEMEAAG LLGVTVGTVK SQTSKALAKL RTVAPELGEL
YVSEGSAR
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