Gene Strop_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3155 
Symbol 
ID5059620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3621405 
End bp3622370 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content72% 
IMG OID640475403 
Producthypothetical protein 
Protein accessionYP_001159967 
Protein GI145595670 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.176196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.13988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAAGC TGCTGGTCCT CGCGCTCGTC GGGTTGGCCG CGCAGCTCGT TGACGGTGCC 
CTCGGCATGG CATACGGGCT GACCTCCTCG ACTCTGCTCC TGCTCGCCGG AATCGCGCCG
GCCGCTGCCT CGGCTTCGGT GCACCTTGCG GAGGTGGGCA CCACGCTCGC GGCGGGGGTG
GCGCACTGGC GGTTCGGCAA CGTCGACTGG CGCGTCGTCC GACGGATCGC GGTGCCTGGT
GCCCTCGGCG CGTTCGCCGG AGCGACCTTT CTGTCCGCCC TCTCCACTGC TGCCGCCGCG
CCTTGGATGG CCGCCATCTT GTTTACCCTT GGCGCGTACC TGCTGGTGCG CTTCGCCCGA
CCACTGCGCA CCGAGCGGCG GGCCGGGCGG TTACGCGGTC GTTTCCTGAG CCCCCTGGGA
CTGGTCGCCG GTTTCGTCGA CGCCACCGGT GGCGGGGGAT GGGGCCCGGT GGCAACCCCC
GCGCTGCTGG TCAGCGGGCG ACTGGAACCC CGCAAGGTGA TCGGCTCGGT GGACACCGCC
GAGTTCCTCG TCGCCGGTGC GGCCAGCGTC GGCTTCCTGA TCGGGCTTGG TTCCGAGGGC
TTTCTGTTGC CGATGGTGCT CGCGCTCCTC GCCGGTGGTC TGATCGCGGC GCCGGTGGCC
GCCTGGCTGA TACGCCTTGT TCCGGCCCAA CTGCTCGGCG CGGTGGTTGG CGGTGTGATC
GTGCTGACCA ACGCTCGTAC GCTGATGCAC GCCCTCGATC TCGATGGGGG TGTGCGGCCC
GTGGGGTATG CCCTGCTGGC GCTCGCCTGG GGTGTCGCGG TCGCGTTCGC GCTGCGGGCC
TTGCTGCGCG CCCGTCATGC CCGGACTGTC GTCGCCGCTG CCCGTGGCGC CACGCCGTCC
CGGCGTGAGG TCAACACCGA ACCGCCCCGG CAGCAGGTGG CGGTCGACTC TGAGTCGGTC
CGGTAG
 
Protein sequence
MRKLLVLALV GLAAQLVDGA LGMAYGLTSS TLLLLAGIAP AAASASVHLA EVGTTLAAGV 
AHWRFGNVDW RVVRRIAVPG ALGAFAGATF LSALSTAAAA PWMAAILFTL GAYLLVRFAR
PLRTERRAGR LRGRFLSPLG LVAGFVDATG GGGWGPVATP ALLVSGRLEP RKVIGSVDTA
EFLVAGAASV GFLIGLGSEG FLLPMVLALL AGGLIAAPVA AWLIRLVPAQ LLGAVVGGVI
VLTNARTLMH ALDLDGGVRP VGYALLALAW GVAVAFALRA LLRARHARTV VAAARGATPS
RREVNTEPPR QQVAVDSESV R