| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3152 |
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| Symbol | |
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| ID | 5059617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3618652 |
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| End bp | 3619656 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475400 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001159964 |
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| Protein GI | 145595667 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.173099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.2174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATCAGC CGGGTGGGTC TGCTGCGACA CAACTGTTGG CGGCGGCGCA GGCGGGTAGC
GGCGACGCCT TCGGCCGTTT GGTGGGGCCG CTGCGGGACG AGCTTCGGGC GTACTGCTAC
CGGATGCTGG GGTCGATTCA TGACGCGGAG GACGCGGTCC AGGACACCCT GGACCGGGCG
TGGCGCAGCC TGGAGCGGTT CGAGGATCAA GGGTCGATCC GACCGTGGTT GTACAAGATC
GCGACAAACC GAGCACTGAC GATCATTGAA CGCAGCGAGC GGCGACGGGA GCTGCCCACC
GACCTGAGCC CGGAAGGGAC ACCGCTGGCC GAGGCGACAT GGCTGGAGCC GTACCCGGAC
CACCTGATGA GCTGGACGGC GCGACTGACC CCGGAAGCCC GCATCGTCGC CCGAGAGAGC
GTGGAGCTGG CGTTCGTCGC CGCCTTGCAC CATCTGTCGG CGTCGCAGCG AGCGGTGCTG
TTGCTGCGCG ACGTGCTCGG CTACTCCGCC AGGGAGGCCG CCGGCGTGTT GGACACCACA
GTCGCCGCCG TCAACAGCGC TCTTCAGCGG GCCCGCAAGG TCGTCATCGA ACGACGTCCG
GAACCCAGCC AGCAGCAGAC CCTCAAGACG CTCGGCGACG CGGCACAACG GGAGGTCGCC
CAGCGGTACC TGACCGCATG GGAGGCCGGT GACGTTGACG CCATCGTGGC GATGCTGACG
GAGAACGCAC GGTACTCGAT GCCGCCGCTG GCGACCTGGT ACGTCGGCCG GGCAGAAATC
CGCGCCTTCC TGGTCGGTGC GGTCCTGCGG CATCGCTGGC GGTTCCTGCC GGTGCAGGCG
AACGGACAGC TCGCGTTCGG CACGTACCTG TGGAGCCACG AGCGGGGCGC GTATGTCCCG
GCCGGTCTGG ACCTGCTGGC GCTGCGGGGT CGGCAGGTGG TCGAGGTGGT CTCGTTCCTC
GATGCCGACT TCCCGACCTT CCGGTTGCCG GACCACCTGA CGTGA
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| Protein sequence | MHQPGGSAAT QLLAAAQAGS GDAFGRLVGP LRDELRAYCY RMLGSIHDAE DAVQDTLDRA
WRSLERFEDQ GSIRPWLYKI ATNRALTIIE RSERRRELPT DLSPEGTPLA EATWLEPYPD
HLMSWTARLT PEARIVARES VELAFVAALH HLSASQRAVL LLRDVLGYSA REAAGVLDTT
VAAVNSALQR ARKVVIERRP EPSQQQTLKT LGDAAQREVA QRYLTAWEAG DVDAIVAMLT
ENARYSMPPL ATWYVGRAEI RAFLVGAVLR HRWRFLPVQA NGQLAFGTYL WSHERGAYVP
AGLDLLALRG RQVVEVVSFL DADFPTFRLP DHLT
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