| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3132 |
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| Symbol | |
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| ID | 5059596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3593563 |
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| End bp | 3595488 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475379 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001159944 |
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| Protein GI | 145595647 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGG ATGACCCCGA CGCCGCCCCG GATCGGCGCA GGCGGAAGGA TGGAGGCATG
CAGCTTCGCA CCGACCTCCG CAACGTCGCC ATCATCGCCC ACGTCGACCA CGGCAAGACC
ACCCTGGTTG ACGCCATGTT GCGGCAGGCT GGCGCCTACG GCGCCCGGGG CGAGGTGACC
GAGCGGGTGA TGGACTCGAT GGATCTCGAA CGCGAGAAGG GCATCACTAT TCTCGCGAAG
AACACCGGCG TGCGGTACGT GCCGGCCGAC GGCTCCGACC CGGTGACGAT CAACATCATC
GACACCCCGG GGCACGCCGA CTTCGGCGGT GAGGTGGAGC GCGGCCTCAC CATGGTCGAC
GGGGTCGTGC TCCTGGTGGA TGCCAGCGAG GGCCCGCTGC CCCAGACCCG GTTCGTGCTT
CGCAAGGCCC TCCGGGCACG GATGCCGATC ATCCTGGTCA TCAACAAGGT GGACCGACCC
GACGCCCGGA TCAAGGAGGT CGTGGACGAC ACCTACGAGC TCTTCCTCGA TCTGGACGCC
GACGATGAAC AGATCGACTT CCCGATCGTG TACGCCTGCG CCCGCGACGG AATCGCCTCC
CTCACCCAGC CCGCCGACGG CGCTGTTCCG CAGGACAGCC ACAACCTCGA ACCGTTGTTC
CGCATCCTGC TCGACACCAT CCCGCCGCCC ACGTACGACG AGCAGGCCCC GCTCCAGGCG
CACGTCACCA ACCTGGACGC CTCACCGTTC CTCGGCCGGC TCGCCCTCTG CCGGGTCCGG
CAGGGCACGA TCGCCAAGGG CCAGACCGTT GCCTGGTGCC GCACCGACGG GAGCAGCCAG
CGGGTGCGGA TCTCCGAGCT GCTGATGACC GAGGGCCTGG AGAGCAAACC GGCCGACTCC
GCCGGTCCGG GTGACATCAT CGCCGTCGCC GGTATCCCGG AGATCATGAT CGGGGAGACG
CTCGCCGACG CGGAGGACCC ACGGCCGCTG CCGCTGATCA CCGTTGACGA GCCGGCCATC
TCGATGACCA TCGGCACCAA CACCTCACCC CTGGTCGGCC GAGCCAAGGG CGCCAAGGTC
ACCGCGCGGA TGGTCAAGGA CCGGCTGGAC CGGGAGCTGA TCGGCAACGT CTCGCTCCGG
GTCCTGCCGA CCGAACGGCC CGACGCCTGG GAGGTACAGG GCCGCGGCGA GCTGGCCCTG
GCCATCCTGG TCGAGCAGAT GCGCCGCGAA TCCTACGAGT TGACCGTCGG CAAGCCGCAG
GTCGTCACCA AGGAGATCGA CGGGAAGACC TGTGAGCCGG TGGAGCGGTT GACCATCGAC
GCCCCGGAGG AGCACCTGGG AGCGATCACC CAGCTGCTGG CCACCCGGAA GGGCCGGATG
GAGCAGTTGG TCAACCACGG CACCGGTTGG ATCCGGATGG AGTGGCTGGT CCCGGCGCGT
GGTCTGATCG GATTCCGCAC CCAGTTCCTC ACCGAGACCC GGGGCACCGG CATCCTGCAC
CACGTCTTCG AGTCGTACGA GCCCTGGTTC GGCGAGCTGC GGACCCGCAA CAACGGCTCG
CTGGTTGCCG ACCGGTCCGG CACCGCCACC TCGTTCGCGA TGATGAACCT GCAGGAACGC
GGCACCCTCT TCGTCGAACC GAGCACCGAG GTGTACGAGG GCATGATCGT CGGGGAGAAC
TCCCGCTCCG ACGACATGGA TGTCAACATC ACCAAGGAGA AGAAGCTCAC CAACATGCGC
TCGTCGACCG CCGACGAGAC GGAGAAGCTG ATCCCGCCCC GCAAACTCTC CCTGGAGCAG
GCCCTGGAGT TCTGCCGTGA GGACGAGTGC GTTGAGGTGA CCCCAGCCGC GGTGCGGATC
CGCAAGGTAC TGCTCGACCA GACGCAGCGG GCTCGGGCGA CGGCCCGCCG CAAGCACGCC
AACTGA
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| Protein sequence | MTRDDPDAAP DRRRRKDGGM QLRTDLRNVA IIAHVDHGKT TLVDAMLRQA GAYGARGEVT
ERVMDSMDLE REKGITILAK NTGVRYVPAD GSDPVTINII DTPGHADFGG EVERGLTMVD
GVVLLVDASE GPLPQTRFVL RKALRARMPI ILVINKVDRP DARIKEVVDD TYELFLDLDA
DDEQIDFPIV YACARDGIAS LTQPADGAVP QDSHNLEPLF RILLDTIPPP TYDEQAPLQA
HVTNLDASPF LGRLALCRVR QGTIAKGQTV AWCRTDGSSQ RVRISELLMT EGLESKPADS
AGPGDIIAVA GIPEIMIGET LADAEDPRPL PLITVDEPAI SMTIGTNTSP LVGRAKGAKV
TARMVKDRLD RELIGNVSLR VLPTERPDAW EVQGRGELAL AILVEQMRRE SYELTVGKPQ
VVTKEIDGKT CEPVERLTID APEEHLGAIT QLLATRKGRM EQLVNHGTGW IRMEWLVPAR
GLIGFRTQFL TETRGTGILH HVFESYEPWF GELRTRNNGS LVADRSGTAT SFAMMNLQER
GTLFVEPSTE VYEGMIVGEN SRSDDMDVNI TKEKKLTNMR SSTADETEKL IPPRKLSLEQ
ALEFCREDEC VEVTPAAVRI RKVLLDQTQR ARATARRKHA N
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