Gene Strop_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3122 
Symbol 
ID5059586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3581242 
End bp3581922 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID640475370 
Productmethyltransferase small 
Protein accessionYP_001159935 
Protein GI145595638 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.206519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.652615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTAG CCACGACCGC GCTGGTCGAT CTGGAACGGG AGATCGCTGC GCCCGGTCAC 
GGCCTGGACC GGCTGCGGCT GCTACCCGTG CCGTTCGTGC CCGGTCTGCG CCTGCACCTG
GCCGAGGATC CGATCGTCTG GTGGGCGCGG ATGGAGGCCC GAGCCGGGCA CGCCCTGCCC
CCGCCGTACT GGGCGTCGGT GTGGCCGGGC GGTCAGGCCC TCGCCCGGCA CCTGCTCGAC
CACCCCGACC TGGTGACGGG TCGCCGGGTA CTCGATCTGG CTGCCGGCTC GGGCGTGGTC
GCGGTCGCGG CCGCGCTGGC CGGCGCGGCG CACGTCCTGG CCGCCGACAC CGACCCTTAC
TCGGTCGCCG CCGTCACGGT CAACGCGCGG GCCAACGGCG TGCGGATCGC GGCCACCGAC
CGGGACCTGC TGGACGGTAC ACCCGCCGAG TTGGACCTGC TGGTCGCCGG CGATGTTCTG
TACGACCGGG CGACGGCGGC ACGGATGCTG CCGTTTCTCC GCCGTGCCGC ATCCGCCGGC
ATCGACGTGC TGGTCGGCGA GCCGGGCCGC GGGCACGTGC CGGCCCACGG GCTGGTGGTC
GTCGCCGAGC ATGAGGTGCC GACCACCGAA CCGACCGCCG ACTCCCCGGT GCGGCGGGTG
CAGGTGCTGC GGCCAGCCTG A
 
Protein sequence
MGVATTALVD LEREIAAPGH GLDRLRLLPV PFVPGLRLHL AEDPIVWWAR MEARAGHALP 
PPYWASVWPG GQALARHLLD HPDLVTGRRV LDLAAGSGVV AVAAALAGAA HVLAADTDPY
SVAAVTVNAR ANGVRIAATD RDLLDGTPAE LDLLVAGDVL YDRATAARML PFLRRAASAG
IDVLVGEPGR GHVPAHGLVV VAEHEVPTTE PTADSPVRRV QVLRPA