| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3105 |
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| Symbol | |
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| ID | 5059569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3557214 |
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| End bp | 3559055 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475354 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001159919 |
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| Protein GI | 145595622 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.34837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.152736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCC CCACCGACCA GCAGCCCGCC GCGTTGGAAA CGCTGCGGCG TGTCTTCGGC
TACGACGCCT TCCGGGGCTT CCAGCAGGAG GTCATCGAGC ACGTGACGGC CGGCGGGGAC
GCCCTGGTAC TGATGCCGAC CGGCGGTGGC AAGTCGCTCT GCTACCAGAT CCCGGCGCTG
CTGCGCGACG GCGTCGCGGT GGTCGTGTCA CCGTTGATCG CGCTGATGCA GGACCAGGTT
GACGCGCTGA CCGCGGTCGG GGTCCGAGCC GGCTTCCTCA ACTCGACGCT TGACGTCGAC
GCCCGCCGCG CCGTCGAGCG GGCCTTCGTC GCCAGGGAGC TGGATCTGCT CTACCTCGCT
CCGGAGGCCC TGGGCACCCG GGGCGTGCAG CACCTGCTCG ACCAGGGGCG GATCAGCCTC
TTCGCGATCG ACGAGGCGCA CTGCGTGTCG CAGTGGGGGC ACGACTTCCG CCCGGACTAC
CTGGCCCTGT CGATGCTGCA CGAACGCTGG CCGGGGGTGC CTCGGATCGC GTTGACGGCC
ACCGCGACCA GCGCCACCCG GGCCGAGATC TCGACCCGGC TCCAGCTCAC CTCGGCCCGG
CACTTCGTCG CCAGCTTCGA CCGGCCCAAC ATCCAGTACC GCATCGCGGC GAAGCGGGAG
CCGAAGCGGC AACTACTGGC CCTGCTCCGT GACGAACACC CGGGGGACGC CGGCATCATC
TACTGCCTGT CCCGGGCCAC CGTGGAGAAG ACCGCGGAGT TTCTGGTCGA CAACGGTGTA
ACCGCGCTGC CCTACCACGC CGGCCTGGAC GCGGTCACCC GCGCCCGGCA CCAGCAGCGC
TTCCTGCGGG AGGACGGCGT GGTCATGGTC GCGACGATCG CGTTCGGGAT GGGCATCGAC
AAGCCCGACG TGCGGTTCGT CGCCCACCTT GACCTACCGA AGTCGGTGGA GGGCTACTAC
CAGGAGACCG GTCGCGCCGG GCGGGACGGC CTACCGGCGA CAGCCTGGCT CGCCTACGGC
CTGACGGATG TGGTGCAGCA GCGCCGGCTG ATCGACACCT CGGAGGGGGA CCCGGCGCAC
CGGCGAAATC TCGCCACCCA TCTGGAGGCG ATGCTCGCGC TCTGTGAGAC GGTCCGCTGC
CGCCGGGCGC AGCTCCTGGA CTACTTCGGC GAGACCGCCC CCGCCTGCGG CAACTGCGAC
ACCTGCCTAC AGCCACCCGA GTCGTGGGAC GGCACGATCG CCGCGCAGAA GCTACTCTCC
ACGATCTACC GGCTCGACCG GGAGCGCAGC CAACGCTTCG GTGCCGGGCA CTGCGTCGAC
ATCCTTCTCG GCCGCGCCAC CGACAAGATC CAGCAGCACC GGCACGACTC CCTGACGGTC
TTCGGGATCG GCACCGACCT GAGCGAGGCG GAGTGGCGGG GGGTGGTCCG GCAGCTGCTC
GCCGAGGGGC TACTGGCGGT CGAGGGCGAC TACGGCACCC TTGCCCTCAC CGACACCAGC
GCGGAGGTGT TGGGCCGACG TCGCACCGTC ATGCTGCGCC GCGAGCCGGC CCGGAAGGCC
CGACCGGCGA AGCCACGCGG CGCGGCCACC GTGGTCGCCG AGCTGACGCC GGCCGCCGCC
GAGGCCTTCG AACGGCTACG CGCCTGGCGG GCCGCCACCG CCAAGGAGCA GGGGGTGCCG
GCGTACGTGA TCTTCCACGA CGCCACGCTG CGACAGATCG CCACCGACGC CCCCGCCGAC
CTGGCCGACC TGGCCAAGGT CGGCGGCGTC GGTGAGGCGA AGCTGGCGAA GTACGGCGAG
CAGGTGCTGA CCGTACTCGC CGACGACCCC CACCCTGCTT GA
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| Protein sequence | MSSPTDQQPA ALETLRRVFG YDAFRGFQQE VIEHVTAGGD ALVLMPTGGG KSLCYQIPAL
LRDGVAVVVS PLIALMQDQV DALTAVGVRA GFLNSTLDVD ARRAVERAFV ARELDLLYLA
PEALGTRGVQ HLLDQGRISL FAIDEAHCVS QWGHDFRPDY LALSMLHERW PGVPRIALTA
TATSATRAEI STRLQLTSAR HFVASFDRPN IQYRIAAKRE PKRQLLALLR DEHPGDAGII
YCLSRATVEK TAEFLVDNGV TALPYHAGLD AVTRARHQQR FLREDGVVMV ATIAFGMGID
KPDVRFVAHL DLPKSVEGYY QETGRAGRDG LPATAWLAYG LTDVVQQRRL IDTSEGDPAH
RRNLATHLEA MLALCETVRC RRAQLLDYFG ETAPACGNCD TCLQPPESWD GTIAAQKLLS
TIYRLDRERS QRFGAGHCVD ILLGRATDKI QQHRHDSLTV FGIGTDLSEA EWRGVVRQLL
AEGLLAVEGD YGTLALTDTS AEVLGRRRTV MLRREPARKA RPAKPRGAAT VVAELTPAAA
EAFERLRAWR AATAKEQGVP AYVIFHDATL RQIATDAPAD LADLAKVGGV GEAKLAKYGE
QVLTVLADDP HPA
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