| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3100 |
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| Symbol | |
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| ID | 5059564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3552892 |
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| End bp | 3553887 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640475350 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001159915 |
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| Protein GI | 145595618 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0582963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.18795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCCG TCCGGGTGGT CGCCTTCGGT GGTGGGCACG GACTCTCCGC TTCGCTGCGG
GCACTGCGGC GCTGTGCTCC CGAACTCGAC CTTGATCTGA CCGCCGTGGT GACCGTCGGC
GACGACGGCG GGTCCAGTGG CCGGCTGCGC GCGGAGCGGG GCGGGCTGCC GCCGGGGGAC
CTGCGGCAGG CGCTCGTCGC GCTGGCCGGA GACCACCCCG CCACCCAGCG TAGCGCCGGG
CTCTTCCAGC ACCGCTTCGC CGCGGTCCCG CCCCCGACGA TCGGCGACCG GGAGGCCGCC
ATCGCGGGCC GGCTGACCGG GCACGCTGTC GGCAATCTCA TGCTCTGCGG GCTGATGGAG
CTGCTCGGCG ACCCGGTGGC GGCGCTGGAG CACGCTGGCG CGATGTTGGG CACCGTCGGG
CGGGTACTGC CGATGTCCTG CGAGCCGGTC GGGATCGAGG CGCGGGTTCG GGGCGTCAAC
CCCGCCCGGC CGGCGGAGGT CGGCATCGTC AGCGGCCAGC ATCAGGTGGC CATCACCACC
GGGCGGGTCG AGTCGCTGCG GCTGGATCCG CAGGCACCGG CGGCCTGCCC CGAGGCGCTG
GCCGCCATCG GCGCGGCCGA CTGGCTCCTC TTCGGCCCAG GTAGCTGGTA CACCAGCGTG
CTGCCGCACC TGCTGGTGCC GGAGCTGGCC GCGGCGATCG TGGCGAGCCC CGCCCGCCGG
TTGGTCACCC TGAACCTGGC CGCCGAGAAG GAGACGTTCG GGCTCTCCGT CGCTGACCAC
CTGGCCGAGC TGCGGTGGTA CCTGCCGACG TTACGGGTCG ACTGCGTACT CGGAGACGTC
AAGGCGGTGG GTGACCCCGA CCCGGTCGAG CGTGCGGCAG AATCCCTGGG CGCTCGGTTG
ATCCTCGCCC CGGTCGCGGT CAACGACGGC ACGCCCTGTC ATGATTCGGC TGCTCTCGCC
GCTGCTTTGG TGCCGGTCCT GGGTGCCGCT CGTTAG
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| Protein sequence | MTAVRVVAFG GGHGLSASLR ALRRCAPELD LDLTAVVTVG DDGGSSGRLR AERGGLPPGD
LRQALVALAG DHPATQRSAG LFQHRFAAVP PPTIGDREAA IAGRLTGHAV GNLMLCGLME
LLGDPVAALE HAGAMLGTVG RVLPMSCEPV GIEARVRGVN PARPAEVGIV SGQHQVAITT
GRVESLRLDP QAPAACPEAL AAIGAADWLL FGPGSWYTSV LPHLLVPELA AAIVASPARR
LVTLNLAAEK ETFGLSVADH LAELRWYLPT LRVDCVLGDV KAVGDPDPVE RAAESLGARL
ILAPVAVNDG TPCHDSAALA AALVPVLGAA R
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