Gene Strop_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3097 
Symbolpgk 
ID5059561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3549335 
End bp3550534 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content72% 
IMG OID640475347 
Productphosphoglycerate kinase 
Protein accessionYP_001159912 
Protein GI145595615 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0767989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.141125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTATCC GCACCCTCGA CGACCTGCTC GCCGAGGAGG TAACGGGTCG GCGGGTGTTG 
GTCCGCGCGG ACCTCAACGT CCCGCTCGAC AAGCAGACGG GTCAGATCGC TGACGACGGC
CGGATTCGGG CCGTGCTGCC GACCCTGAGC GCGCTGGTCC AGGCCGGCGC GAAGGTGGTC
GTCTGCTCCC ACCTGGGGCG GCCGAAGGGC AGCCCCAACC CGGTGTTCAG CCTGCGTCCG
GTCGCCGGGC GGCTCGGTGA GCTGCTCGGC GCGCCGGTGC ACTTCGCCGA GGACACGGTC
GGCGACTCGG CCCGGTCCAC CGTGGCCGAT CTCGCCGACG GCCAGGTCGC CCTGCTGGAG
AACCTTCGGT TCAACCCGGG TGAGACCAGC AAGGACGAGG CGGAGCGGGG TGCCTTCGCC
GACCAGCTCG CCGCGCTCGC CGACGCGTAC GTGGACGACG CGTTCGGCGC GGTGCACCGT
CGGCACGCGA GCGTGTACGA CGTACCGGCC CGGCTGCCGC ATGTGGCGGG CCGGTTGGTG
TTGCGCGAGG TGGAGGTACT CGGCACCCTC GCCGGGGAGC CGGACCGCCC GTATGTGGTG
GTGCTCGGCG GATCCAAGGT CTCCGACAAG CTGGCGGTGA TCGAGGCGCT GCTGCCGAAG
GTCGACCGGC TGCTGGTCGG TGGCGGCATG TGCTTCACCT TCCTCAAGGC GCAGGGCCAC
GAGGTGGGCT CCTCGCTGTT GGAGGAGGAG ATGGTCGAGA CCTGCCGGAG CCTGCTGGAG
CGCGCCGACG GCAAGATCAT GCTTCCGGTT GACGTGGTGG CGGCGGACGC GTTCGCCCCC
GACGCCCCGC ACGACACGGT GCGGGCCGAC GGGATCCCCA GCAAGCGGGT CGGGCTCGAC
ATCGGCCCGG AGACGGTGGC GGGTTTCGCC GCCGCGCTGC GGGGCGCTCG GACGATCTTC
TGGAACGGCC CGATGGGCGT TTTCGAGATG GCGGCCTTCG CGCACGGCAC CCGCGGCGTC
GCCGAGGCGA TCGCGACGTC GGACGCCTTC ACCGTGGTCG GCGGCGGCGA CTCCGCCGCC
GCGGTGCGGG CACTCGGCCT CGACGAGCAG GCGTTCAGCC ACATCTCGAC CGGCGGCGGC
GCCAGTCTTG AATACCTGGA GGGCAAGACC CTCCCCGGCA TCGCGGCCTT GGAGAGCTGA
 
Protein sequence
MTIRTLDDLL AEEVTGRRVL VRADLNVPLD KQTGQIADDG RIRAVLPTLS ALVQAGAKVV 
VCSHLGRPKG SPNPVFSLRP VAGRLGELLG APVHFAEDTV GDSARSTVAD LADGQVALLE
NLRFNPGETS KDEAERGAFA DQLAALADAY VDDAFGAVHR RHASVYDVPA RLPHVAGRLV
LREVEVLGTL AGEPDRPYVV VLGGSKVSDK LAVIEALLPK VDRLLVGGGM CFTFLKAQGH
EVGSSLLEEE MVETCRSLLE RADGKIMLPV DVVAADAFAP DAPHDTVRAD GIPSKRVGLD
IGPETVAGFA AALRGARTIF WNGPMGVFEM AAFAHGTRGV AEAIATSDAF TVVGGGDSAA
AVRALGLDEQ AFSHISTGGG ASLEYLEGKT LPGIAALES