Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3097 |
Symbol | pgk |
ID | 5059561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3549335 |
End bp | 3550534 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475347 |
Product | phosphoglycerate kinase |
Protein accession | YP_001159912 |
Protein GI | 145595615 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0767989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.141125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTATCC GCACCCTCGA CGACCTGCTC GCCGAGGAGG TAACGGGTCG GCGGGTGTTG GTCCGCGCGG ACCTCAACGT CCCGCTCGAC AAGCAGACGG GTCAGATCGC TGACGACGGC CGGATTCGGG CCGTGCTGCC GACCCTGAGC GCGCTGGTCC AGGCCGGCGC GAAGGTGGTC GTCTGCTCCC ACCTGGGGCG GCCGAAGGGC AGCCCCAACC CGGTGTTCAG CCTGCGTCCG GTCGCCGGGC GGCTCGGTGA GCTGCTCGGC GCGCCGGTGC ACTTCGCCGA GGACACGGTC GGCGACTCGG CCCGGTCCAC CGTGGCCGAT CTCGCCGACG GCCAGGTCGC CCTGCTGGAG AACCTTCGGT TCAACCCGGG TGAGACCAGC AAGGACGAGG CGGAGCGGGG TGCCTTCGCC GACCAGCTCG CCGCGCTCGC CGACGCGTAC GTGGACGACG CGTTCGGCGC GGTGCACCGT CGGCACGCGA GCGTGTACGA CGTACCGGCC CGGCTGCCGC ATGTGGCGGG CCGGTTGGTG TTGCGCGAGG TGGAGGTACT CGGCACCCTC GCCGGGGAGC CGGACCGCCC GTATGTGGTG GTGCTCGGCG GATCCAAGGT CTCCGACAAG CTGGCGGTGA TCGAGGCGCT GCTGCCGAAG GTCGACCGGC TGCTGGTCGG TGGCGGCATG TGCTTCACCT TCCTCAAGGC GCAGGGCCAC GAGGTGGGCT CCTCGCTGTT GGAGGAGGAG ATGGTCGAGA CCTGCCGGAG CCTGCTGGAG CGCGCCGACG GCAAGATCAT GCTTCCGGTT GACGTGGTGG CGGCGGACGC GTTCGCCCCC GACGCCCCGC ACGACACGGT GCGGGCCGAC GGGATCCCCA GCAAGCGGGT CGGGCTCGAC ATCGGCCCGG AGACGGTGGC GGGTTTCGCC GCCGCGCTGC GGGGCGCTCG GACGATCTTC TGGAACGGCC CGATGGGCGT TTTCGAGATG GCGGCCTTCG CGCACGGCAC CCGCGGCGTC GCCGAGGCGA TCGCGACGTC GGACGCCTTC ACCGTGGTCG GCGGCGGCGA CTCCGCCGCC GCGGTGCGGG CACTCGGCCT CGACGAGCAG GCGTTCAGCC ACATCTCGAC CGGCGGCGGC GCCAGTCTTG AATACCTGGA GGGCAAGACC CTCCCCGGCA TCGCGGCCTT GGAGAGCTGA
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Protein sequence | MTIRTLDDLL AEEVTGRRVL VRADLNVPLD KQTGQIADDG RIRAVLPTLS ALVQAGAKVV VCSHLGRPKG SPNPVFSLRP VAGRLGELLG APVHFAEDTV GDSARSTVAD LADGQVALLE NLRFNPGETS KDEAERGAFA DQLAALADAY VDDAFGAVHR RHASVYDVPA RLPHVAGRLV LREVEVLGTL AGEPDRPYVV VLGGSKVSDK LAVIEALLPK VDRLLVGGGM CFTFLKAQGH EVGSSLLEEE MVETCRSLLE RADGKIMLPV DVVAADAFAP DAPHDTVRAD GIPSKRVGLD IGPETVAGFA AALRGARTIF WNGPMGVFEM AAFAHGTRGV AEAIATSDAF TVVGGGDSAA AVRALGLDEQ AFSHISTGGG ASLEYLEGKT LPGIAALES
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