Gene Strop_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3091 
Symbol 
ID5059555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3543068 
End bp3544735 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content72% 
IMG OID640475341 
Productphosphoglucose isomerase (PGI) 
Protein accessionYP_001159906 
Protein GI145595609 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.220877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC TTCTCGGACA GCCCGTCGAG GCCGCTGCCG GCCTTTCCGT GCGCGGGGCG 
GAGGCGGTCG ACCAGGCCGC GGCCGCCTCC ACGCGGACCG CGGTGACAAT GGCCGGGGTG
CCGGGCCAAC TGGCCGCCAA GGACCCCACG CTCTGGGGAC CGGAGGCGGA GGCCGAGGCG
CGGGTTCGAC TGGGTTGGGT CGACACCCAC ACCCGAAGCC GGGAGCTGCT TCCGCAACTC
GCCGAGCTGA CCTCGGAGCT GGCCGACCTG GACCACGTGG TGCTGTGTGG GATGGGGGGT
TCGTCGCTGG CTCCCGAGGT GATCGCCCGG ACCCTCGGCC GGCCGCTGAC CATCCTGGAC
ACCACCGACC CGGGCCAGGT CCGGGCGGCG CTCGCCGACC GCCTGGAGCG GACCGTCGTC
GTGGTGGCCA GCAAGTCCGG CTCGACCGTG GAGACCGACA GCCAGCGGCG CGCGTACTGG
CAGGCGTTCC TCGACGCGGG GATGTCCGAG GCCGAGGCCG GGCGGCACTT CGTGATCGTC
ACCGACCCGG GCTCGCCGCT GGCGGCGACC GCCGCCGAGA TGGGAGCGTT CACCGTGCTG
GCCGACCCGA ACGTCGGCGG GCGCTTCTCC GCGCTGACCG CGTTCGGACT CGTTCCGACG
GCGCTGGCCG GAGTCGAGGT GACCGAGCTG CTGGACCAGG CCGAGGCCTT CGCCGGGTCG
TTGGCCTCCG AGCGGGACAA TCCGGCGCTG GCGCTGGGCG CCGCGCTGGG TGCGGCGGCC
ACCGCCGGCC GAGACAAGGT GACATTGATC TCGGACGGCG GTGGAATCGA CGGGCTCGGT
GACTGGGCCG AGCAACTGAT CGCCGAGTCG ACCGGCAAGT CCGGGATCGG CATCCTGCCG
GTCGTCGTCG AGTCGCCGAC CAGCCCCGGC GTCACCGGCA AGGACATCCT CACCATCAGC
TACGGCGGCG CGCTGACCGC CGGGGAACTC AACGACGGGG AAGCCACGTC CGGCGGCACG
CCGGACGTGG CGGTCAACGG TCCGTTGGGG GCGCAGTTCC TCGCCTGGGA GTATGCGGTC
GCGGTCGCCG GCGTGGTGCT CGGCATCGAC GCGTTCAACC AACCGAATGT CACCGAGAGC
AAGGAGAACA CCAACAAGAT CCTGGCCTCG GGCGCGCCGA CGGAACAGCC GTCGTTCACC
GAGGGCGCGA TCGAGGTGTA CGCCCCGCCG GGTGTGCCGA ACGACCTGGC CGGCGCACTG
CGCTGGCTGG TCGATGGCAT CCATGGCGAC GGCTATCTCG CGATCATGGC GTACCTCGAC
CGCGGGGCCG ATGCAGACGC GGCCCGGCTA CGCCCCGCGT TGGCCGAAGC GGTCGGCCCG
CCGGTGACCT TCGGCTGGGC CCCTCGGTTC CTGCACTCCA CCGGGCAATA TCACAAGGGC
GGCCCACAGG TGGGCAGCTT CCTCCAGATA ACCGGTACCG TCGACGTTGA TCTGCCGGTG
CCCGGGAAAC CGTACAGCTT CGGGGAGTTG CAGGCGGCCC AGGCCGCCGG CGACCGGCAG
GCCCTGGCGG ACCGGAAGCG TCCACTGCTG CGGCTACACC TGACCGACCG GTCCGCGGGT
GTGGCGCAGC TGTTGGAGGC GGCTGGCGCG CTACCCAAAC GACGATGA
 
Protein sequence
MSELLGQPVE AAAGLSVRGA EAVDQAAAAS TRTAVTMAGV PGQLAAKDPT LWGPEAEAEA 
RVRLGWVDTH TRSRELLPQL AELTSELADL DHVVLCGMGG SSLAPEVIAR TLGRPLTILD
TTDPGQVRAA LADRLERTVV VVASKSGSTV ETDSQRRAYW QAFLDAGMSE AEAGRHFVIV
TDPGSPLAAT AAEMGAFTVL ADPNVGGRFS ALTAFGLVPT ALAGVEVTEL LDQAEAFAGS
LASERDNPAL ALGAALGAAA TAGRDKVTLI SDGGGIDGLG DWAEQLIAES TGKSGIGILP
VVVESPTSPG VTGKDILTIS YGGALTAGEL NDGEATSGGT PDVAVNGPLG AQFLAWEYAV
AVAGVVLGID AFNQPNVTES KENTNKILAS GAPTEQPSFT EGAIEVYAPP GVPNDLAGAL
RWLVDGIHGD GYLAIMAYLD RGADADAARL RPALAEAVGP PVTFGWAPRF LHSTGQYHKG
GPQVGSFLQI TGTVDVDLPV PGKPYSFGEL QAAQAAGDRQ ALADRKRPLL RLHLTDRSAG
VAQLLEAAGA LPKRR