| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3089 |
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| Symbol | |
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| ID | 5059553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3539652 |
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| End bp | 3541877 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475339 |
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| Product | transketolase |
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| Protein accession | YP_001159904 |
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| Protein GI | 145595607 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.37552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGAT CCCCGGGCGG ACGTTTAGGA CCGCTCGATA AGGTCACCGG TGAGGGTTCC
GCCCATCTGT CGAGGAGCAC AACCAACGTG GCTGACAACC GACCCGAGCT TCCTGCACTC
AACTGGTCCG ACCTCGACCG TCAGGCGGTC GACACGGTCC GCGTGCTGGC CATGGACGCC
GTCGAGAAAT CCGGCAACGG CCACCCCGGC ACCGCGATGA GCCTGGCGCC CGCGGCCTAC
CTACTCTTCA ACCGGGTCAT GCGACATAAC CCCGCCGACC CGACCTGGCC CGGCCGCGAC
CGCTTCGTGC TCTCCGCCGG GCACTCCAGC CTCAGCCTCT ACATCCAGCT CTACTTCTCC
GGCTATCCGA TGAGCCTCAC CGACCTCGAG GGGCTGCGGC AGTGGGGCTC GCTCACCCCC
GGTCACCCCG AGTACGGGCA CACCCCGGGG GTGGAGACCA CCACCGGCCC GCTCGGACAG
GGCCTGGGCA ACGCGGTCGG GATGGCGATG GCCGCCCGCC GTGAACGCGG GCTGTTCGAC
CCCGAGCCGA AGCTCGGCAC CTCGGTCTTC GACCACGACA TCTGGTGTAT CGCCTCCGAC
GGCGACATCG AGGAGGGGGT CAGCCACGAG GTCAGCGCCC TCGCCGGCCA CCAGCAGCTG
GGCAATCTCT GCGTGATCTA CGACGACAAC GAGATCTCGA TCGAGGACGA CACCCGGATC
GCCAAGAGCG AGGACGTCGC GGCCCGCTAC CGGGCGTACG GGTGGCACGT GCAGACGGTC
GACTGGCGGC GCGGCGACGC CGACCAGGAC GACTACCACG AGGACGTGGC CACGCTGTAC
CGGGCGCTGC TGGCCGCCAA GGCCGAGACC GGTCGGCCGT CGTTCATCGC CCTGCGCACC
ATCATCGGCT GGCCGGCGCC GAACAAACGG AACACCGGCA AGATCCACGG TTCGGCGCTC
GGTGCCGACG AGGTCGCGGC GACCAAGGAA CTCCTCGGCT TCGACCCGCA GCGCACCTTC
GAGGTCGACG AGGGCGTCCT CAAGCACACC CGCCAGGTGC GCGAACGCGG CATCGCCGCC
CAGCGTGAGT GGACCGAGAC CTTCGAGGCC TGGGGGCAGG CGAACCCGGA ACGCAAGGAG
CTCTGGGACC GAATGGCCAC CCGGACGCTG CCACGAGGCT GGACGGACGC CCTACCCGCG
TTCCCCGCCG ACGCCAAGGG CATCGCCACC CGCGCCGCCT CCGGCACGGT CCTCGGCGCG
CTCGCACCGG TGCTGCCGGA GCTGTGGGGC GGCTCGGCAG ACCTGGCGGA CAGCAACAAC
ACCACCATGA AGGGCGAGCC GTCCTTCATC CCGGCCGAGC ATGCCACCAA GGACTTCCCG
GGCAACGAGT ACGGCCGCAC GCTGCACTTC GGCGTCCGCG AACACGCGAT GGGCGCCATC
CTCAACGGGA TCGCTCTGCA CGGTGGCACC CGCCCGTACG GCGGTACGTT CCTCGTCTTC
AGCGACTACA TGCGCCCGTC GGTACGCCTC GCGGCGATGA TGAAGCTGCC GGTGACCTAC
GTCTGGACAC ACGACTCGAT CGGCCTCGGC GAGGACGGTC CGACCCACCA ACCGGTGGAG
CAGCTGACCT CGCTGCGAGC AATCCCCGGA CTGGATGTGG TACGTCCCGC CGACGCGAAC
GAGACCGCGT GGGCCTGGCG GCAGATCCTG ACGCATACCG ATCGGCCGGC CGCGTTGGCA
CTGAGCCGCC AGCCGTTGCC GACCCTGGAT CGATCCGTGC TCACCAGCGC GGAAGGGGTG
GCCCGCGGCG GGTACGTGCT GGTCGACGCT GTTGGCGGCA AGCCGCAGGT GATCCTTCTC
GCCACCGGTT CGGAGGTGCA GCTCTGCCTC ACCGCCCGGG AGCGGCTGGA GGCCGACGGC
ACCCCCACCC GGGTCGTCTC CATGCCCTGC CAGGAGTGGT TCCGGGCTCA GGATGAGGCG
TACCAGGAGT CGGTCCTACC CCGTGGGGTA AAGGCACGGG TGAGCGTGGA GGCGGGCGTC
GCGATGTCCT GGCGGGCCTT CGTCGGTGAC TGCGGCGAGA GCATCAGCCT GGAGCACTTC
GGGGCGAGCG CCCCGCACAC CGTGCTCTTC GAGCAGTTCG GTTTCACCCC GGACCGGATC
GTGGGTGCGG CGCACGCCGC GCTGACCCGG GTCGGCGACA TCACCGGTAA TCCGACCGGC
AACTGA
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| Protein sequence | MHGSPGGRLG PLDKVTGEGS AHLSRSTTNV ADNRPELPAL NWSDLDRQAV DTVRVLAMDA
VEKSGNGHPG TAMSLAPAAY LLFNRVMRHN PADPTWPGRD RFVLSAGHSS LSLYIQLYFS
GYPMSLTDLE GLRQWGSLTP GHPEYGHTPG VETTTGPLGQ GLGNAVGMAM AARRERGLFD
PEPKLGTSVF DHDIWCIASD GDIEEGVSHE VSALAGHQQL GNLCVIYDDN EISIEDDTRI
AKSEDVAARY RAYGWHVQTV DWRRGDADQD DYHEDVATLY RALLAAKAET GRPSFIALRT
IIGWPAPNKR NTGKIHGSAL GADEVAATKE LLGFDPQRTF EVDEGVLKHT RQVRERGIAA
QREWTETFEA WGQANPERKE LWDRMATRTL PRGWTDALPA FPADAKGIAT RAASGTVLGA
LAPVLPELWG GSADLADSNN TTMKGEPSFI PAEHATKDFP GNEYGRTLHF GVREHAMGAI
LNGIALHGGT RPYGGTFLVF SDYMRPSVRL AAMMKLPVTY VWTHDSIGLG EDGPTHQPVE
QLTSLRAIPG LDVVRPADAN ETAWAWRQIL THTDRPAALA LSRQPLPTLD RSVLTSAEGV
ARGGYVLVDA VGGKPQVILL ATGSEVQLCL TARERLEADG TPTRVVSMPC QEWFRAQDEA
YQESVLPRGV KARVSVEAGV AMSWRAFVGD CGESISLEHF GASAPHTVLF EQFGFTPDRI
VGAAHAALTR VGDITGNPTG N
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