Gene Strop_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3084 
Symbol 
ID5059548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3535017 
End bp3535763 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID640475334 
Productregulatory protein, ArsR 
Protein accessionYP_001159899 
Protein GI145595602 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00550431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.268013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGGG TCTCGGGGCG CCAGCTGGCA CCCGTCGGGG GCGCTGGCGG GTCGGCCGTC 
TCCGACCCGT CGACCCGTGA CCGCGTCACC CAGCTGCTGC TGGAGCGGGG CGCCACCACC
GCCGCGCAGC TGGGGCATGC GCTTGGGCTC AGCCCCGCCG CGATCCGACG ACACCTGGAC
GCGATGCTCG CCGAGGGGGA TGTCCTCGCC CGCGATCCGG CGGTCCGAGG CCACCGTGGG
CGCGGCCGTC CGGCCAAGGT GTTCCTGCTA ACCGAGGCGG CCCGAGGTCG CTGCGGCACC
CACCACTACG ACAACATGGC CACCGCCGCG CTGCGCTGGA TCGCCCGGGG TGGGGGGTCG
GCGGCGGTGT CGGCCTTCGC CGCCGAGCAG GTCTCCGCCC TGGAGACCCG CTGCCTGGCC
GCCATGGAAG ACGCCGGCGA CGACCCGCTC GCCCGCGCGG AGGCACTCGC CGCCGCCCTG
ACCGCGGAGG GCTACGCTGC CAACGCCTCC ACGATCGCCT CGGGGGGCCA GCTGTGCCAG
CATCACTGCC CGGTGGCGCA TGTGGCCGCC GAGTTTCCGC AGCTGTGCGA GGCCGAGACC
GCGGTGATCT CCCGTCTGGT CGGCACCCAC GTGCAGCGCC TGGCGACCAT TGCGCACGGC
GACGGGGTGT GCACGACGCA CATCCCGGCC CAGCCGGGGC GTGTTCAGTC CGGTAAGACC
GTTACCACTG TGAGGACAGA TAGATGA
 
Protein sequence
MAGVSGRQLA PVGGAGGSAV SDPSTRDRVT QLLLERGATT AAQLGHALGL SPAAIRRHLD 
AMLAEGDVLA RDPAVRGHRG RGRPAKVFLL TEAARGRCGT HHYDNMATAA LRWIARGGGS
AAVSAFAAEQ VSALETRCLA AMEDAGDDPL ARAEALAAAL TAEGYAANAS TIASGGQLCQ
HHCPVAHVAA EFPQLCEAET AVISRLVGTH VQRLATIAHG DGVCTTHIPA QPGRVQSGKT
VTTVRTDR