Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3084 |
Symbol | |
ID | 5059548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3535017 |
End bp | 3535763 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640475334 |
Product | regulatory protein, ArsR |
Protein accession | YP_001159899 |
Protein GI | 145595602 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00550431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.268013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGGGG TCTCGGGGCG CCAGCTGGCA CCCGTCGGGG GCGCTGGCGG GTCGGCCGTC TCCGACCCGT CGACCCGTGA CCGCGTCACC CAGCTGCTGC TGGAGCGGGG CGCCACCACC GCCGCGCAGC TGGGGCATGC GCTTGGGCTC AGCCCCGCCG CGATCCGACG ACACCTGGAC GCGATGCTCG CCGAGGGGGA TGTCCTCGCC CGCGATCCGG CGGTCCGAGG CCACCGTGGG CGCGGCCGTC CGGCCAAGGT GTTCCTGCTA ACCGAGGCGG CCCGAGGTCG CTGCGGCACC CACCACTACG ACAACATGGC CACCGCCGCG CTGCGCTGGA TCGCCCGGGG TGGGGGGTCG GCGGCGGTGT CGGCCTTCGC CGCCGAGCAG GTCTCCGCCC TGGAGACCCG CTGCCTGGCC GCCATGGAAG ACGCCGGCGA CGACCCGCTC GCCCGCGCGG AGGCACTCGC CGCCGCCCTG ACCGCGGAGG GCTACGCTGC CAACGCCTCC ACGATCGCCT CGGGGGGCCA GCTGTGCCAG CATCACTGCC CGGTGGCGCA TGTGGCCGCC GAGTTTCCGC AGCTGTGCGA GGCCGAGACC GCGGTGATCT CCCGTCTGGT CGGCACCCAC GTGCAGCGCC TGGCGACCAT TGCGCACGGC GACGGGGTGT GCACGACGCA CATCCCGGCC CAGCCGGGGC GTGTTCAGTC CGGTAAGACC GTTACCACTG TGAGGACAGA TAGATGA
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Protein sequence | MAGVSGRQLA PVGGAGGSAV SDPSTRDRVT QLLLERGATT AAQLGHALGL SPAAIRRHLD AMLAEGDVLA RDPAVRGHRG RGRPAKVFLL TEAARGRCGT HHYDNMATAA LRWIARGGGS AAVSAFAAEQ VSALETRCLA AMEDAGDDPL ARAEALAAAL TAEGYAANAS TIASGGQLCQ HHCPVAHVAA EFPQLCEAET AVISRLVGTH VQRLATIAHG DGVCTTHIPA QPGRVQSGKT VTTVRTDR
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