| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3070 |
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| Symbol | |
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| ID | 5059534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3521497 |
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| End bp | 3522261 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640475320 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159885 |
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| Protein GI | 145595588 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.962948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.131558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG GCCTGACTGA CCGCGTGTAC GTGCTCACCG GCGCTTCCCA GGGCCTCGGC
TACGCGACCG CCGAGGCGCT CGTCGCGGAC GGGGCTCGCG TCGTCCTCGC CGCCCGGGAC
GCCGCGGCGG TGACCGCCGC CGCCCACCGC CTCGGTGGCC CCGCGCACGC CGTCGGCGTG
ACCGCCGACC TCTCCGACCC GGAGTTACCC GAGCGGCTGA CGGCGACCGC CCGGGACGCG
TTCGGGCGGC TGGACGGCGC GCTGGTGTCG GTCGGCGGGC CACCGCCGGG TAGCGCGGCC
ACGGTGACCG ACGAGCAGTG GCGCGCCTCC TTCGAAACGA TCTTCCTCGG CACCGTCCGA
ATGGCGCGGA CCGTAGCCGC CGCGCTGCCC GACGGCGGGG CGATCGGGCT GGTGCTGTCC
ACCTCGGCCC GGGCGCCGCT GGCCGGCCTG GGCATCTCCA ACGGTCTCCG ACCCGGCCTG
GCCGGAGTCG CCAAGGACAT GGCCGACGAG TACGGCCCCC AGGGCGTACG CGTGGTGGGC
CTGTTGCCGG GGCGGATCCT GACCAACCGG AACGCGCAGC TCTTCGCCGC CACCGGGGAT
CCCGAGCAGG CCCGCGCCAT GGCGGAGGCG GAGATCCCGC TCCGCCGGCT GGGCGAGCCG
GCGGAGTTCG GCCGGGTGGC GGCGTTCGTG CTCTCCCCCG CTGCCGGCTA CCTGACCGGA
ATCACGCTAC CGGTGGATGG CGGCGCGCTA CGCGGACTGG GTTGA
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| Protein sequence | MDLGLTDRVY VLTGASQGLG YATAEALVAD GARVVLAARD AAAVTAAAHR LGGPAHAVGV
TADLSDPELP ERLTATARDA FGRLDGALVS VGGPPPGSAA TVTDEQWRAS FETIFLGTVR
MARTVAAALP DGGAIGLVLS TSARAPLAGL GISNGLRPGL AGVAKDMADE YGPQGVRVVG
LLPGRILTNR NAQLFAATGD PEQARAMAEA EIPLRRLGEP AEFGRVAAFV LSPAAGYLTG
ITLPVDGGAL RGLG
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