Gene Strop_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3060 
Symbol 
ID5059524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3508078 
End bp3510099 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content67% 
IMG OID640475310 
Producthypothetical protein 
Protein accessionYP_001159875 
Protein GI145595578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.103594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACT ACCTACCGAA GAACAACGCG ACCGACCCGG AGGCGACGTC GAAACGACGG 
CGCAAGCTCT GGCTCGCCAG CGGCGTCGCC GGTCTCACCG GCGTGGTCAG CATCGCCGCG
GTCGGCCTTA CCGGGGTCGG CGCCGGCGCC CAGGACATGG CATGGAACAC CGCTCAGGTC
ACCAAGGACG GCGAACAGTC CGCCGACGAC CGGGAGATGG GCCGCGAAGG CGACTGGGAA
AGGGGCCGCG AAGGCGACTG GGGGAAGGGC CGCGAAGGCG ACTGGGACAG CCGGCACGGA
CACCAAGGCC GCGAGAAGAA GCGCGGAAAG GAGGTGCCCT GCAAGACCGA CAAGCTGATC
CAGGCGATCA TCTACGCCAA CAACAACCAG GGTGGCGTAC TCAAGCTGGC CAAAGACTGC
ACCTACACGC TGACCCGTTC CGACGGCTTC GGCAACGGCC TGCCGGTGAT CGAGGAACCG
ATCAAGCTCA TCGGCCACAA CACCAAGATT GTCCGGGACA GCCAGGCCGA GTTCTTCCGG
ATCCTCAACG TCGGTCGCGG CGGACAGCTG AAGGTCGAGG GCCTGTCCAT CAAGGGCGGC
AAGACCCTGG AAGTCGAGCA GGGCGAGAAC ACGCCCGAGG CAGTGTGGGC GCGCTTCTCA
AACTCGGTCG CGGCGGGTGA GGCGGCCCAG GCTGGCCAGC CGTACCTACC GCTGTTGCAG
GGCGAGCCGC AGGCGGCGGA CGCCGAGGCA ACGACCCCCG CCGAAGCGGC CAGCCCCAGG
GCCAACACCG AGACCCCCGC CGAGGCAGCG CAGACATCAC AGTGGTCAAA CGGCGCGGCG
AACGGGAACG GCGCCGCCAT CGGTAACGGT GCCGCCAACC GTGCAGCCGC CGCCAACGGT
GCAGCCGCCG GCAACGAGAA CGGTGCCACG GACTGGAGCG GAAACGGCGC CGCCAACGGT
GCAGCCGCCG CCAACGGTGC AGCCGCCGGC AACGAGAACG GTGCCACGGA CTGGAGCGGA
AGCGGCGCCG CCAACGGTGC AGCCGCCGCC AACCGTGCAG CCGCCGGCAA CGAGAACGGT
GCCACGGACT GGAGCGGAAA CGGCGCCGCC AACGCGGACA ACGCCGCCGA TGCGGCCAAC
GTTCTTCAGG ACGAGAATCT CAGCGACGGC GCCGGTGTCC TGGTGCAGGC GGGCGGTTCC
GCCGAGTTCG AAAAGTCCCA CGTGGAGCAC AACCTCGCGG GTGGACTCGG GGGTGGGATC
GCCAACTTCG GCAAGACCAG CCTCTACCAC ACCACCGTGG CCGACAACCA CGCCTTCCAA
TTCGGTGGCG GCATCTTCAA CGCCGGAATG CTGAAAATCT CCTCGTCGAG GGTGAAGGAC
AACGGCGCCA TCATCGGCGG TGGCGGCATC TCCAACGGAG CGGCACTCGT CGACGGTGAG
GACACCGACG CCGGCACGGT CCGGATCGAG AAGGCCGAGA TCACCGCCAA TGAGACGCTC
GGCTTCGGTG GTGGCCTGCT CGACATCGGG GGCGACACCA CGATCACGCA GTCGAAGATC
ACCAGCAACC TGGCGCTCCT CGCCGGTGGT GGCATCGCGG CGGTCGGGCA GAGCAACCTC
TACCTGAAGG AGACAGAGGT CGCCAAGAAC ACCACCACCG GTGCCGGCGG CGGCTTGGCC
CTGGTGCTCG GTGCCATCGT CAACGTGGAC AAGAGCAAGG TCCTGGACAA CAAGGCCGTT
ACCTTCGGCG GCGGTGTGTT CAACGTCCTC AGCGCGGTCA CCTTCCGGAA CAGCTCGGTC
TCCGGCAACC TGGCCGCTGT CTCCGGCGGC GGGATCTTCA ACGTCGCGGG AGCGGTTGAC
CTGACCGCCT CCAAGGTGAC GAAGAACCGC TCCACCTTCG AGCCGGGTGG CGTGTTCAGC
GCACTGGGCG AGGTTACGGT GGACAACAAG TCCGCGATCA AGGGCAACGA CCCGACCAAC
TGCCAGGGCA GTGTCGACGA GATCGAGAAC TGCTTCGGCT GA
 
Protein sequence
MYNYLPKNNA TDPEATSKRR RKLWLASGVA GLTGVVSIAA VGLTGVGAGA QDMAWNTAQV 
TKDGEQSADD REMGREGDWE RGREGDWGKG REGDWDSRHG HQGREKKRGK EVPCKTDKLI
QAIIYANNNQ GGVLKLAKDC TYTLTRSDGF GNGLPVIEEP IKLIGHNTKI VRDSQAEFFR
ILNVGRGGQL KVEGLSIKGG KTLEVEQGEN TPEAVWARFS NSVAAGEAAQ AGQPYLPLLQ
GEPQAADAEA TTPAEAASPR ANTETPAEAA QTSQWSNGAA NGNGAAIGNG AANRAAAANG
AAAGNENGAT DWSGNGAANG AAAANGAAAG NENGATDWSG SGAANGAAAA NRAAAGNENG
ATDWSGNGAA NADNAADAAN VLQDENLSDG AGVLVQAGGS AEFEKSHVEH NLAGGLGGGI
ANFGKTSLYH TTVADNHAFQ FGGGIFNAGM LKISSSRVKD NGAIIGGGGI SNGAALVDGE
DTDAGTVRIE KAEITANETL GFGGGLLDIG GDTTITQSKI TSNLALLAGG GIAAVGQSNL
YLKETEVAKN TTTGAGGGLA LVLGAIVNVD KSKVLDNKAV TFGGGVFNVL SAVTFRNSSV
SGNLAAVSGG GIFNVAGAVD LTASKVTKNR STFEPGGVFS ALGEVTVDNK SAIKGNDPTN
CQGSVDEIEN CFG