Gene Strop_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3055 
Symbol 
ID5059519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3494094 
End bp3494951 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID640475305 
Productmethyltransferase type 11 
Protein accessionYP_001159870 
Protein GI145595573 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.346509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAC AGACCGACCT CACCGCCCGA GTCCGGGACG CCTACGACAA GTCCGCTGAC 
CAGTACGATT CCGCCGGCCA ACTCCTCTTC CACCCACTGG GCAAAACGGT CGCCGACCTG
CTGGAGCTCA AGCCGGGCGA GCGGGTGCTC GACCTCGGCT GCGGTCGTGG CGCCTGCCTG
TTTCCGATCG CCGCCCAGGT CGGTACCGAG GGTTTCGTGC TCGGCATCGA CCAGGCACCC
GGCATGGTGG AGGCGTGTGG GGCCGACCTT GAGGCCCGCG GACTGGCCGA CCGGGCGCAG
GTGCGGCTCG GTGACGTCCA GAGCTTCACC GTTGACCGGC CCTTCGACGC GATCAGCGCC
GGCATGGTTC TGTTCCTGCT ACCGGCACCG CAGCAGGCGT TGGCCGCTGC CGCGGCGGCG
CTGCGCAGCG GTGGACGGCT GGTCGCGACG ACCTTTCCGA CGGAGAACGG CCGACTCGCC
GCCGGCTGGG AGTCGGCGGA GATTCTCGCC GAGGTGTTGT CCACCTATCT CCCGGAGGGC
GTCGACGATC CATGGCAGCT TGTCCTCGGT CTCAACGGAC CGCTGGTCTC CGAGGAGTCA
ACCGCCAGCG CGGTCCTGAC GGCGGGCTTC ACCGATGTCG ACATTCGTCA CATAGCAGCG
AAGTCCCGAT TCGAGTCGAT CGACGACTAC CTCGCCTGGA CCTGGACGGT CACCCCGCGC
ATGCTGTGGG AACTGGTGCC GCCGGAGCGG CGGACCGAGG CCACCAACGC GGCCCGGACC
GCGTTGCGGA GCCTGGCGGG TTCCGACGGT TCGCTGGTGT TCTCCTGCCC GACCCGGACC
ATTCGCGCCG TCCGTTAA
 
Protein sequence
MTEQTDLTAR VRDAYDKSAD QYDSAGQLLF HPLGKTVADL LELKPGERVL DLGCGRGACL 
FPIAAQVGTE GFVLGIDQAP GMVEACGADL EARGLADRAQ VRLGDVQSFT VDRPFDAISA
GMVLFLLPAP QQALAAAAAA LRSGGRLVAT TFPTENGRLA AGWESAEILA EVLSTYLPEG
VDDPWQLVLG LNGPLVSEES TASAVLTAGF TDVDIRHIAA KSRFESIDDY LAWTWTVTPR
MLWELVPPER RTEATNAART ALRSLAGSDG SLVFSCPTRT IRAVR