Gene Strop_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3036 
Symbol 
ID5059500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3466814 
End bp3468058 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content71% 
IMG OID640475286 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_001159851 
Protein GI145595554 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.340151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGA CCGCACAACC GACGACACCC GGCGTAACGT CCCCCGCCGT CCAGCCGCAG 
CTGGCGGGGG CCGGTGGTGG GCTCGGTCTG CTGCTCCTAC TCGGGGCGAT CACCGCGATC
GGCCCGCTCT CCCTGGACAT GTACCTGCCG GCACTCCCCG CCATGGCCCG AGACCTGGAC
GCGAGCCAGG CCCAGATTCA ACTCTCCCTC ACCACCTGCC TGGTTGGGCT CGCCCTCGGG
CAGTTCGTCA CCGGTCCGCT CAGTGACCGC TGGGGCCGGC GCCGCCCCGT GCTGATCGGC
CTCGTGGCGT ACACCGTGCT CGCCCTGGCC TGCGCCGCGG CGCCCAGCGC ACCGGCGTTC
ACCGCCTTGC GGTTCGCTCA GGGCTTCGCC GGCGGCATGG CCGCCGTGGT GACCCGTGCC
GTCGTTCGCG ACCTGCACTC CGGTCGCGCG GCAGCAAAGT ACTTCTCTCG GCTCACCCTG
GTCTTCGGTC TCGCCCCGAT CGCCGCGCCG ACCGTCGGCA GCCTGGTGCT GCGATTCGGG
TCGTGGCGGA CCCTGTTTGT CCTACTCGCT GTCGTCGGCG CACTGCTCAC CGCCGTGGTG
GCGACCTGGC TGCCCGAGAC CCTGCCCGCG CACCGGCGCA GCCGCGACGG CCTCGGCGGC
ATCGTCCGGT CGCTTCGCGA GCTCCTCACC GACCGGGTCT ACCTGGGGTA CACGCTGACC
CAGGGGCTCG CCTTCGCCGG GCTGTTCGCG TACATCTCCG GTTCGTCGTT CGTCTTCCAA
GACGTGTTTC ACCTCTCGGC GAGCACATTC GGTCTACTGT TCGGCCTCAA CGCGTTGGCC
TTCGTGGCGG TCGGGCAGGC CAATGCCCGA CTGCTGGACC GATTCCCGCC CCGCGCCCTG
CTGGTCGGCA CTCTCGGGGT GAGCGCAGTC GCAGCCGCTG GCGTGCTGGC CGGCGCGATC
GCCACCAGCC AGCTACTCCT CATCGGCGCA CTGCTGACCT TCATCGGGTC GCTGGGCATG
GTGATGCCGA ACGGCACTGC CCTCGCTCTC GACCGGCACG CGCACCACGC CGGGACCGCG
GCAGCGCTGA TGGGCGCACT CCAGTCGGTG ATCGGGTCGC TCGCCGCGCC CCTGGTCGGG
TTGGGCGGGG AGGGCAGCGC CGTGCCGATG GCAGCGGTGC TCGCAGCCTC AGCCGCACTG
TCGCTCACCG CCGCACTCAC CCTGGCCCGT CCCGAACGCC CCTGA
 
Protein sequence
MTQTAQPTTP GVTSPAVQPQ LAGAGGGLGL LLLLGAITAI GPLSLDMYLP ALPAMARDLD 
ASQAQIQLSL TTCLVGLALG QFVTGPLSDR WGRRRPVLIG LVAYTVLALA CAAAPSAPAF
TALRFAQGFA GGMAAVVTRA VVRDLHSGRA AAKYFSRLTL VFGLAPIAAP TVGSLVLRFG
SWRTLFVLLA VVGALLTAVV ATWLPETLPA HRRSRDGLGG IVRSLRELLT DRVYLGYTLT
QGLAFAGLFA YISGSSFVFQ DVFHLSASTF GLLFGLNALA FVAVGQANAR LLDRFPPRAL
LVGTLGVSAV AAAGVLAGAI ATSQLLLIGA LLTFIGSLGM VMPNGTALAL DRHAHHAGTA
AALMGALQSV IGSLAAPLVG LGGEGSAVPM AAVLAASAAL SLTAALTLAR PERP