Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3030 |
Symbol | |
ID | 5059494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3461751 |
End bp | 3462299 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640475280 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001159845 |
Protein GI | 145595548 |
COG category | [S] Function unknown |
COG ID | [COG3402] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.62962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGCG ACGACCAGGC CGGGCTCCCG CCCGCTGCCC CACCCCCGAC CGGTCCACCA CCCGGTCCGC TGGAGCCCTG GCCGGAGACC GTCCGCTGGC AGTCCGTCTC CACCGACCTG ATCTGGGTTG AGTTGCTACG GCTGGCCGTG CTGATCGTCA TCGTGCTGGC CGGGCTGGCA GTGGGGTGGG CAGTCAGCGG CCAGGCGGCG TTCGGGGTGG CCCTCACCGG AGTGCTCCTG CTGACCGCGC TACGGACGGT CACCATCGCG CGGGCCGTAC GTGCGTGGGG GTACGCCGAA CGCGAGGATG ACCTGCTGGT CCGACACGGC CTGCTGGTGC GCCGGCTCTC CATCGTCCCG TACTCGCGGA TGCAGTTCGT TGATGTCAGC GCCGGCCCGC TGGAACGGGC CTTCAGCCTG GCTACCGTCC AACTGCACAC GGCGGCGGCG GCCACCGACG CTCGAGTGCC GGGGTTACGC CCGGCGGAGG CGTCCCGCCT CCGCGACCGC CTCACCGCGC TCGGCCGCGA CCGGGCGGAG GGTTTGTGA
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Protein sequence | MTGDDQAGLP PAAPPPTGPP PGPLEPWPET VRWQSVSTDL IWVELLRLAV LIVIVLAGLA VGWAVSGQAA FGVALTGVLL LTALRTVTIA RAVRAWGYAE REDDLLVRHG LLVRRLSIVP YSRMQFVDVS AGPLERAFSL ATVQLHTAAA ATDARVPGLR PAEASRLRDR LTALGRDRAE GL
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