Gene Strop_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3030 
Symbol 
ID5059494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3461751 
End bp3462299 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content73% 
IMG OID640475280 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001159845 
Protein GI145595548 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.62962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG ACGACCAGGC CGGGCTCCCG CCCGCTGCCC CACCCCCGAC CGGTCCACCA 
CCCGGTCCGC TGGAGCCCTG GCCGGAGACC GTCCGCTGGC AGTCCGTCTC CACCGACCTG
ATCTGGGTTG AGTTGCTACG GCTGGCCGTG CTGATCGTCA TCGTGCTGGC CGGGCTGGCA
GTGGGGTGGG CAGTCAGCGG CCAGGCGGCG TTCGGGGTGG CCCTCACCGG AGTGCTCCTG
CTGACCGCGC TACGGACGGT CACCATCGCG CGGGCCGTAC GTGCGTGGGG GTACGCCGAA
CGCGAGGATG ACCTGCTGGT CCGACACGGC CTGCTGGTGC GCCGGCTCTC CATCGTCCCG
TACTCGCGGA TGCAGTTCGT TGATGTCAGC GCCGGCCCGC TGGAACGGGC CTTCAGCCTG
GCTACCGTCC AACTGCACAC GGCGGCGGCG GCCACCGACG CTCGAGTGCC GGGGTTACGC
CCGGCGGAGG CGTCCCGCCT CCGCGACCGC CTCACCGCGC TCGGCCGCGA CCGGGCGGAG
GGTTTGTGA
 
Protein sequence
MTGDDQAGLP PAAPPPTGPP PGPLEPWPET VRWQSVSTDL IWVELLRLAV LIVIVLAGLA 
VGWAVSGQAA FGVALTGVLL LTALRTVTIA RAVRAWGYAE REDDLLVRHG LLVRRLSIVP
YSRMQFVDVS AGPLERAFSL ATVQLHTAAA ATDARVPGLR PAEASRLRDR LTALGRDRAE
GL