Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3018 |
Symbol | |
ID | 5059482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3450618 |
End bp | 3451727 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640475268 |
Product | band 7 protein |
Protein accession | YP_001159833 |
Protein GI | 145595536 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.506434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCC TGTTGCCGGT CCTGTTGATA GCTCTGGCGA TTATTGGCGT GGTGACTCTG GCCCAGGCGG TGCGGATCGT GCCGCAGCAG CGCCAGGACG TGGTGGAGCG GCTCGGCCGA TACAAGCGCA CGCTCGACCC GGGGCTGAAC ATGCTGGTGC CCTTCATCGA TGCGGTACGC ACCAAGGTCG ACATGCGCGA GCAGGTAGTC AGCTTCCCGC CGCAGCCGGT CATCACCTCG GACAACCTGG TCGTATCGAT CGACACCGTG CTGTATTTCA AGGTGGTGGA CTCCTTCCAC GCCACCTACG AGATCTCGAA CTTCCTGCAG GCCATCGAGC AGCTCACGGT GACCACACTG CGCAATGTCA TCGGCTCTCT TGATCTGGAG CGGGCGCTGA CCAGCCGGGA GGAGATCAAC CGGCACCTCT CCGGCGTGCT GGACGAGACC ACCGGTCGGT GGGGCATCAA GGTGACCCGG GTGGAGATCA AGGCGATCGA GCCGCCGCCG AGCATTCGGG ACTCGATGGA GAAGCAGATG CGCGCCGAGC GGGACCGCCG GGCCGCGATC CTCACCGCCG AGGGGCACAA GGAGTCGCAG ATCCTCACCG CAGAGGGTGA GAAGCAGGCG GCAGTGCTGC GCGCCGACGG TGACCGGCAG GCCCGAATCC TTGAGGCCGA GGGGCAGGCG AAGGCGGTCC GTACCGTCTT CGACGCGATT CACCAGGCGA ACCCGAGCCA GAAGGTGCTC GCCTACCAGT ACCTGCAGGC GCTGCCGCAG ATCGCCAACG GCTCCGCCAA CAAGGTCTGG ATCGTCCCGG CCGAGCTGAC CAAGGCGCTG GAGGGCATGG GGGGCGCGCT GGGAGGCCTG AGCCAGATGG CTGATGACGC CCCGTCGCCG GAGGCCGCCG ACGGCGCCAG CCAGGTCGAG CGGGAGGCCG ACGAGGCCGC ACGGGCCGCC GCGGACGCCG CGCAGGAGAT CCACAACGAG GTACGCGTCG CTGAGGCGCA GGCCGCCGGA GGCGCGGAGC CGAAGGGGCT GCCCGCACCC GAGCCGGTCT CCGGGGACAG TGTGGTGAAC GACTCCACCG ACCAGCGCAA GCGGGGCTGA
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Protein sequence | MDFLLPVLLI ALAIIGVVTL AQAVRIVPQQ RQDVVERLGR YKRTLDPGLN MLVPFIDAVR TKVDMREQVV SFPPQPVITS DNLVVSIDTV LYFKVVDSFH ATYEISNFLQ AIEQLTVTTL RNVIGSLDLE RALTSREEIN RHLSGVLDET TGRWGIKVTR VEIKAIEPPP SIRDSMEKQM RAERDRRAAI LTAEGHKESQ ILTAEGEKQA AVLRADGDRQ ARILEAEGQA KAVRTVFDAI HQANPSQKVL AYQYLQALPQ IANGSANKVW IVPAELTKAL EGMGGALGGL SQMADDAPSP EAADGASQVE READEAARAA ADAAQEIHNE VRVAEAQAAG GAEPKGLPAP EPVSGDSVVN DSTDQRKRG
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