Gene Strop_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3018 
Symbol 
ID5059482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3450618 
End bp3451727 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID640475268 
Productband 7 protein 
Protein accessionYP_001159833 
Protein GI145595536 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.506434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCC TGTTGCCGGT CCTGTTGATA GCTCTGGCGA TTATTGGCGT GGTGACTCTG 
GCCCAGGCGG TGCGGATCGT GCCGCAGCAG CGCCAGGACG TGGTGGAGCG GCTCGGCCGA
TACAAGCGCA CGCTCGACCC GGGGCTGAAC ATGCTGGTGC CCTTCATCGA TGCGGTACGC
ACCAAGGTCG ACATGCGCGA GCAGGTAGTC AGCTTCCCGC CGCAGCCGGT CATCACCTCG
GACAACCTGG TCGTATCGAT CGACACCGTG CTGTATTTCA AGGTGGTGGA CTCCTTCCAC
GCCACCTACG AGATCTCGAA CTTCCTGCAG GCCATCGAGC AGCTCACGGT GACCACACTG
CGCAATGTCA TCGGCTCTCT TGATCTGGAG CGGGCGCTGA CCAGCCGGGA GGAGATCAAC
CGGCACCTCT CCGGCGTGCT GGACGAGACC ACCGGTCGGT GGGGCATCAA GGTGACCCGG
GTGGAGATCA AGGCGATCGA GCCGCCGCCG AGCATTCGGG ACTCGATGGA GAAGCAGATG
CGCGCCGAGC GGGACCGCCG GGCCGCGATC CTCACCGCCG AGGGGCACAA GGAGTCGCAG
ATCCTCACCG CAGAGGGTGA GAAGCAGGCG GCAGTGCTGC GCGCCGACGG TGACCGGCAG
GCCCGAATCC TTGAGGCCGA GGGGCAGGCG AAGGCGGTCC GTACCGTCTT CGACGCGATT
CACCAGGCGA ACCCGAGCCA GAAGGTGCTC GCCTACCAGT ACCTGCAGGC GCTGCCGCAG
ATCGCCAACG GCTCCGCCAA CAAGGTCTGG ATCGTCCCGG CCGAGCTGAC CAAGGCGCTG
GAGGGCATGG GGGGCGCGCT GGGAGGCCTG AGCCAGATGG CTGATGACGC CCCGTCGCCG
GAGGCCGCCG ACGGCGCCAG CCAGGTCGAG CGGGAGGCCG ACGAGGCCGC ACGGGCCGCC
GCGGACGCCG CGCAGGAGAT CCACAACGAG GTACGCGTCG CTGAGGCGCA GGCCGCCGGA
GGCGCGGAGC CGAAGGGGCT GCCCGCACCC GAGCCGGTCT CCGGGGACAG TGTGGTGAAC
GACTCCACCG ACCAGCGCAA GCGGGGCTGA
 
Protein sequence
MDFLLPVLLI ALAIIGVVTL AQAVRIVPQQ RQDVVERLGR YKRTLDPGLN MLVPFIDAVR 
TKVDMREQVV SFPPQPVITS DNLVVSIDTV LYFKVVDSFH ATYEISNFLQ AIEQLTVTTL
RNVIGSLDLE RALTSREEIN RHLSGVLDET TGRWGIKVTR VEIKAIEPPP SIRDSMEKQM
RAERDRRAAI LTAEGHKESQ ILTAEGEKQA AVLRADGDRQ ARILEAEGQA KAVRTVFDAI
HQANPSQKVL AYQYLQALPQ IANGSANKVW IVPAELTKAL EGMGGALGGL SQMADDAPSP
EAADGASQVE READEAARAA ADAAQEIHNE VRVAEAQAAG GAEPKGLPAP EPVSGDSVVN
DSTDQRKRG