Gene Strop_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3013 
Symbol 
ID5059477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3443655 
End bp3444347 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID640475263 
Producthypothetical protein 
Protein accessionYP_001159828 
Protein GI145595531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTGCA GCCACATCCT GCACCGGGTG GATGACATCC ACGCCGCAGT GCGAGCGTTC 
CAGCAGCTCG GGTTCACGGT CGTCTATGGT CGTCGGCCCG ACCGCAGTTC GAATGCGTTG
ATCTGGTTCG AGGAGGGTCC GTTTATTGAG CTGGTCCGGG TTCCGCGGCT GTCTCTACCG
CTACGGTGGG CGGTCCAGTT GTACGGCGGC CGTGGCATGC GGCGGCGGGT GGAACGGTGG
GCCGGACGGG ACGGTTCGTG GATCGATGTG TCCGTCGAGA CCGACGACGA GTCGATCAGC
GTTGAACGGG ACCGGCTCGT CGCCGCGGGC GTGCCGATGA GCCGGATTCT GAACATGCGC
AGGTCGACCC CGGACGGCGT CACCCTCCGC TGGCAGCTCG CCGTGCCGCA GGACCCGAGC
CTGCCGTTCG CCATGTCCGC CTACCGGCCG CAAGCCCGGC CGGAGCGGGT CGTGCATGCC
AACGGCGCCA CCGCGGTCGC GCGCGTCCAC GTCGCGGTCC CAGCGGCCAC CCGTGCGGCC
TGGCAGTCAC TCCTCGACGG TGAGGACCCG TGGATCCGGT TCGCGGACGG TGACGGCGAC
GGCGTCCAGC TGGTCGAGCT GTCGGGTCTG ACCGCGCCCC TTGATCTGGA ATCCATCGGT
GGGCTGCCGC TACAACCGGT CGACTCGCCA TGA
 
Protein sequence
MRCSHILHRV DDIHAAVRAF QQLGFTVVYG RRPDRSSNAL IWFEEGPFIE LVRVPRLSLP 
LRWAVQLYGG RGMRRRVERW AGRDGSWIDV SVETDDESIS VERDRLVAAG VPMSRILNMR
RSTPDGVTLR WQLAVPQDPS LPFAMSAYRP QARPERVVHA NGATAVARVH VAVPAATRAA
WQSLLDGEDP WIRFADGDGD GVQLVELSGL TAPLDLESIG GLPLQPVDSP