| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3011 |
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| Symbol | |
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| ID | 5059475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3441859 |
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| End bp | 3443259 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640475261 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_001159826 |
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| Protein GI | 145595529 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.802976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATC AGGACCACAA CCGCGGACAC GAGTGGGATC GCTTTGGTGG TGACCCTGCA
CGACCACGGT GGCGGTGGTG GGTCGTCGGC TTGGTGGGTA TGACCGGCTT GGCATTAACT
GTCGTTGGTG GTGTGGCGAC ACCGGCCGTC GGTGCGGGCG GACGTGTCCT CACCAGCGCC
GAGGAGCAGC CGGGGGCGTC CGCTGGGGAT CGGCCCGGAG GCGGGTACCG CGACGACGGC
AAGGGTGCTG TCGAGGGCTT GGGTGAGGCC AAGGGGAGGA AGGGGGGTAA GGGGCAGGGT
GTGCCGGTCG CGTGCGATGC GGACGCGTTG ATTGCCGCGA TCAGTGCGGG CAATGCGCGT
GGTGGTGCCG TGCTCGACCT GGCCAAGGGC TGCACCTACC TGCTCACCGC TGATCTCGGG
GGTGCTGGTC TGCCCGTGAT TACCGCCCCG ATCACGCTCA ATGGTGGTAA GCACACGACT
ATCAAGCGGG CAGCTGCGGT TGACCAGTTC CGGATCCTCA CCGTCGACAC CGGCGGTGAC
CTCACCCTCA ACCACCTGAC CATCACCGGC GCGCAGACCG TCCAAAACGG CGGGGCGATC
TTCGTCAACA CCGGTGGTGC TCTCACCCTT GATCGCACCA TGCTCATGCG CAACATCAGC
GCACAGGGGG GTGGTGGCAT CCGAAACCTG GGAACCACCA CCGTCACACA CTCCCGCATC
GAACGGAACA TCGCCGGCGA GAACGGGGGT GGAGTCCTCA ACACGGGCGT GCTCAGGATT
CACTCCTCCG CTGTGGACGG CAACGTCGCC ACCAATGGTG GTGGCATCTC CAGCACCGGC
ACCGTTACTG CTGCCCACAG TGCAATCACC GGGAATCGGG CAACATCCGT GGTCGGCGGT
GGACTGCTCG TCACCGGAGG AACCGCATCA ATTACCGACT CTCGGGTAGT CCGAAACTCC
TCCAACGTCG AGGGCGGCGG AGTGGCGTCC ATTACCTCGC AGATCACCCT GCACCGGGTC
GTCATCGCTG ACAACGCCGC CCGCGCTGGA AGCGGCGGGC TACTTGTCGG CGCCTCCTCG
GCCGTCGTCC GGCAGAGTGT CATCGAGGGC AACAACACCG CCAACACCGA TGGCGGAGGC
GTCTTCAACG CTGGCGACTT GTCACTGTTC GACACCCAGA TCCGTGGCAA CCGTGCCGCT
CGTGGTGCGG GCATCTATAA TGACGCACTC GGCGCGCTCG CCCTGTATAG CAGCACGATC
AAGAAGAATA TCGCCGTCAC CGACGGTGGT GGAATCTTCA ACGAGCCGGG TGCAACGGTC
GAGCTGAACA CGGCTACTGG CACGACTGTC ATCAAGAACC GGCCCAACAA CTGCGTGAAC
GTTGTCGGCT GCCCGGGCTG A
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| Protein sequence | MRHQDHNRGH EWDRFGGDPA RPRWRWWVVG LVGMTGLALT VVGGVATPAV GAGGRVLTSA
EEQPGASAGD RPGGGYRDDG KGAVEGLGEA KGRKGGKGQG VPVACDADAL IAAISAGNAR
GGAVLDLAKG CTYLLTADLG GAGLPVITAP ITLNGGKHTT IKRAAAVDQF RILTVDTGGD
LTLNHLTITG AQTVQNGGAI FVNTGGALTL DRTMLMRNIS AQGGGGIRNL GTTTVTHSRI
ERNIAGENGG GVLNTGVLRI HSSAVDGNVA TNGGGISSTG TVTAAHSAIT GNRATSVVGG
GLLVTGGTAS ITDSRVVRNS SNVEGGGVAS ITSQITLHRV VIADNAARAG SGGLLVGASS
AVVRQSVIEG NNTANTDGGG VFNAGDLSLF DTQIRGNRAA RGAGIYNDAL GALALYSSTI
KKNIAVTDGG GIFNEPGATV ELNTATGTTV IKNRPNNCVN VVGCPG
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