| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3005 |
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| Symbol | murD |
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| ID | 5059469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3434756 |
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| End bp | 3436102 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640475255 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001159820 |
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| Protein GI | 145595523 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.113641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTGT CTGACCTGCG CGGACGCAAA GTCGCGGTCT GGGGGACCGG TCGGGAGGGA
CGAGCGGCGG TGGTCGCGAT CGCCGCGCAC GGCCCGGCGG ACCTGGTCGC TGTCGACGAC
GGCGGCTCGA CGGTCAGCCC GCCCTGGGAC GGATTTCTCG CGACGGCGGC GCCGCTGGTC
ACCGGCGACG CGGGGGCGCA ACGGCTGGCC GCCGCCGACG TGGTGGTCCG CTCGCCGGGT
GTCCCGAACA CCCACCCGTG GCTGGCCGAG CTGTGGCGAC GTCAGGTGCC GGTCACCCAG
GGCACGGCGC TCTGGATGGC CGACCACGCC GCCCGCACCG TCGGGGTCAC CGGCAGCAAG
GGCAAGAGCA CCACCTCCAG CCTGATCAGC CACCTGCTCG CCGCGGTGGA CCAGCCCAAC
GTCTTCGGTG GCAACATCGG GGTGCCGACG TTGGACCTGC CGGCGGCCGA CCTCTACGTG
CTGGAGCTCT CCAGCTACCA GTGCAGCGAC TTGACCGACT CGCCCCGGGT GGCGGTGGTG
ACCGCGCTCT TCCCCGAGCA CCTGGACGCC CACGGCGGCG AACGGGAGTA CTACCGGGAC
AAGCTCAACC TGCTCGCCCA CGGCCCGGAG ACCGTCGTGG TCAACGGCGC CGACCCGCGG
CTCGCCGCCG AGCTCGGTGA CCGGCCCGTT GTGCGAGCCG GCACCCCCGA CACCACCCAC
GTGGCGGGCG GCCCGGACGG CACGCCCTGG TTCCACCTCG GCGACCAGCC GCTCTTCCCC
CGGGCGGTGC TGCCGCTGGT CGGACGGCAC AACGAGGGCA ACCTCTGCGT GGCGCTGGCC
GTGCTCGACG TGCTCGGCGT CGACGTGCTC GCCCGCCGGG ACACCCTGGC GGTGGCCGTC
GCCGGGTTCC AGGGGTTGGC ACACCGGCTC ACCGAGATCG TTGATCCGTC CGGTCTCACC
TTCGTCGACG ACACCCTCGC CACCAGCCCG TACGCGGCCA TGCACGCGAT CGACGCGTAC
GACGGGCGGG CGCTTACCGT GATCGTCGGC GGTGCCGACC GGGGCCTGGA CTACACGCCG
CTGCGCGATC ACCTCGCCGA GCGGGAGATC ACCGTGATCG GCGTACCGGA CAGCGGGGCG
CGGATCGTCG CCGCGCTGGA CGGGTTGCCG AAGGTCCGAT GCGATGTCAC CGGCGATCTG
GTCGAGGCGG TTCGGCTGGC CCGGCGGGTC ACTCCGGCCG GCGGGGTGGT GCTGCTGTCG
CCAGCGGCAC CGAGCTACGG GCAGTTCCGT AACTTCGAGC ACCGCTCCGA GGTCTTCGCC
CAGGCGGTCC GCGACACCGC CGGCTGA
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| Protein sequence | MRLSDLRGRK VAVWGTGREG RAAVVAIAAH GPADLVAVDD GGSTVSPPWD GFLATAAPLV
TGDAGAQRLA AADVVVRSPG VPNTHPWLAE LWRRQVPVTQ GTALWMADHA ARTVGVTGSK
GKSTTSSLIS HLLAAVDQPN VFGGNIGVPT LDLPAADLYV LELSSYQCSD LTDSPRVAVV
TALFPEHLDA HGGEREYYRD KLNLLAHGPE TVVVNGADPR LAAELGDRPV VRAGTPDTTH
VAGGPDGTPW FHLGDQPLFP RAVLPLVGRH NEGNLCVALA VLDVLGVDVL ARRDTLAVAV
AGFQGLAHRL TEIVDPSGLT FVDDTLATSP YAAMHAIDAY DGRALTVIVG GADRGLDYTP
LRDHLAEREI TVIGVPDSGA RIVAALDGLP KVRCDVTGDL VEAVRLARRV TPAGGVVLLS
PAAPSYGQFR NFEHRSEVFA QAVRDTAG
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