| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3001 |
|---|
| Symbol | |
|---|
| ID | 5059465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3431392 |
|---|
| End bp | 3432444 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640475252 |
|---|
| Product | asparaginase/glutaminase |
|---|
| Protein accession | YP_001159817 |
|---|
| Protein GI | 145595520 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.889945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGAGC AGCGCGCATC GGTGCTGATG CTCTCCCTCG GCGGCACGAT CGCCATGACC
GGCGGCACCG ACGGCGTCGT GCCGACGCTG ACCGCCGAGG ATCTCATCGC CGCCGTACCC
GGATGGGCCG ACACCGGCAT CGACGTACCG GTCCAGACCT TCCGCCAACT GCCGAGCGCC
TCCCTCAGCA TCGATGACCT CACGGCGCTG GCCACCCTGA TCGCCGAGCG CACCGGGACC
GGGGACGTGC ACGGCGTCGT GGTCACCCAG GGCACCGACA CCATCGAGGA AACCGCGTAC
CTGCTCGACC TGCTGCACGC TGGCGACGCG CCGATCGTGG TCACCGGGGC GATGCGCAAC
CCCACCCTGG TCGGCGCCGA CGGGCCCGCC AACGTCCTCG CCGCGATCCA CACCGCCGCC
AGCACCGCCG CCCGCGGCCT CGGCACTCTG GTGGTCTTCG CCGACGAGAT CCACGCCGCC
CGGCACGTCC GCAAGACGCA CTCCACCAGC GGCGCCACCT TCCGCTCGCC CAACACCGGC
CCGCTCGGCC ACGTCGTCGA AGGCGCGGTA CGGCTGCTCG CCCACCCGCC CCACCGCCTG
ACCGTGCCGC TGGGGATGGT CACCCGCGAT CCCCGGGTCG GGCTGTACAC CGTGACCGTC
GGTGACGACG GCACTTTGCT CGCCGGCGCC GAGCACCTGG ACGGCCTCGT CGTGGCCGGC
TTCGGCGTCG GCCACGTACC CCAACGGCTG GTTGACCACC TCGCCGCCCT CGCGGCGAGG
ATCCCGGTCG TACTCACCTC CCGCATCGGC GCCGGACCAG CCCTGGACGC CACCTACGCC
TTCCCCGGCT CGGAGATCGA CCTGCGGCAG CAGGGACTGA TCGGTGCCGG GTTCCTCGAC
CCGTACAAGG CCCGTATCCT GCTGCACACC CTGCTCGCCG TCAGCGCCGA CCGCGACACC
GTCATCGCCG GGATCACCGC CGCCAGCGGC ACCGGAGACC CCGCCCTCTG GCCCTGGGCC
AACGCCGCCT GGGACCGGAC GCAACGTCGA TGA
|
|---|
| Protein sequence | MTEQRASVLM LSLGGTIAMT GGTDGVVPTL TAEDLIAAVP GWADTGIDVP VQTFRQLPSA
SLSIDDLTAL ATLIAERTGT GDVHGVVVTQ GTDTIEETAY LLDLLHAGDA PIVVTGAMRN
PTLVGADGPA NVLAAIHTAA STAARGLGTL VVFADEIHAA RHVRKTHSTS GATFRSPNTG
PLGHVVEGAV RLLAHPPHRL TVPLGMVTRD PRVGLYTVTV GDDGTLLAGA EHLDGLVVAG
FGVGHVPQRL VDHLAALAAR IPVVLTSRIG AGPALDATYA FPGSEIDLRQ QGLIGAGFLD
PYKARILLHT LLAVSADRDT VIAGITAASG TGDPALWPWA NAAWDRTQRR
|
|---|
| |