| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2983 |
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| Symbol | |
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| ID | 5059447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3411952 |
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| End bp | 3413355 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640475234 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001159799 |
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| Protein GI | 145595502 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.105062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTA CCCCCGATCT CAACCGCCGG AGCCTGCTGC GTCGCGCCGC CGCCGCGGGT
CTGCTGACCC TCCCGGCCGC CGGCCTGCTC AGCGCCTGCG CCGGCAGCGA GCCAGCCCAG
GACGACAACT CCGGTGCCGC GAAGACCAAG GACAACCCGT TCGGTGTCCA GGACGGCAGC
TCCGTCAAGG TGGTCATCTT CAACGGCGGG CTGGGCGACC AGTGGGCCAA GGAGGACGAG
GCCGTCTTCA AGGCCAGGCA TCCGAGCGTC ACGGTCAACA TGTCCTCGAC CCAGAAGATC
AAGACCGAAG AGCAGCCGAA GATGGCGACC CAGCCCAGCG ACGTCGTCAT GAACTCCGGC
GCCGACAGTA TGGACATCAG CACCCTGGTC AACGAGGGCG CGATCGAGCC GCTGGAGGAC
CTGCTCGCCG CCCCGGCGTG GGACAGCGAG GGCACGGTGG CGGACACCCT GCTGCCGGGG
ACCGTCAACG ACGGCACCTT CCAGGGCAAG TTCTACGTGG TGAACATCGC GTACACGGTC
TGGGGTAACT GGTACAACGC CGCCCTCTTC GACAAGGAGG GCTGGCAGCC GCCGAAGACC
TTCGACGAGT TCTTCGCCCT CGCGCCGAAG ATCAAGGCGA AGGGCATGGC CCCGTACGTC
TACGACGCGG TGCACGGCTA CTACCCGCGG TGGGCGCTGA TGGCGACGAT CTGGAAGTCC
GCCGGCAAGC AGGCCGTGAT CGACATCGAC AACCTCAAGG AGAACGCCTG GAAGGCTGAC
GGGGTGCTAC CGGCCCTCGA GGCGTGGGAG AAGCTGGTCA AGGACAAGCT GCTGCTCCCC
GGCCAGCTGG ACCACACCCA GTCGCAGCAG GCGTGGCTCG ACGGCAAGGC CGCTTTCATC
CAGGTCGGCA CCTGGCTCAA GAACGAGATG GCGGAGACCA TCCCCCCGGG CTTCGAGATG
ACGCTGTCGG ACTACTGGAG CCTGGGGGCG GGCGACAAGG CACCGAACGA CGTCTACGCC
GGTGCGGGCG AGAACATCGT CGTGCCCTCG AAGGCGCCGA ACAAGGCCGC TGCCAAGGAG
TTCCTGCGGG CGGTGCTCTC CAAGGAGGGC TCGGCGAAGT TCGCTGAGCT GACCAAATCC
CTCGCCTCCA CCAAGGGCTC CGGGGACAAC GTCGAGGACT CGGCGCTGGC CAGCGCGAAC
GAGCTGATGC GCAACGCACC ACAGGATCTC GTCTCGTTCA AGTTCTGGAA CTTCTACGCC
GACCTGGACA AGGAGAGCCA GAACCTCTCC GCCGAGCTGA TGGCCGGCCG GATGACCGCC
CAGCAGTTCG TCGACGGTAT GCAGGGCGCC GCTGACAAGG TCGCCAAGGA CTCGTCGATC
AAGAAGCAGA CCCGCTCCGC CTGA
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| Protein sequence | MSATPDLNRR SLLRRAAAAG LLTLPAAGLL SACAGSEPAQ DDNSGAAKTK DNPFGVQDGS
SVKVVIFNGG LGDQWAKEDE AVFKARHPSV TVNMSSTQKI KTEEQPKMAT QPSDVVMNSG
ADSMDISTLV NEGAIEPLED LLAAPAWDSE GTVADTLLPG TVNDGTFQGK FYVVNIAYTV
WGNWYNAALF DKEGWQPPKT FDEFFALAPK IKAKGMAPYV YDAVHGYYPR WALMATIWKS
AGKQAVIDID NLKENAWKAD GVLPALEAWE KLVKDKLLLP GQLDHTQSQQ AWLDGKAAFI
QVGTWLKNEM AETIPPGFEM TLSDYWSLGA GDKAPNDVYA GAGENIVVPS KAPNKAAAKE
FLRAVLSKEG SAKFAELTKS LASTKGSGDN VEDSALASAN ELMRNAPQDL VSFKFWNFYA
DLDKESQNLS AELMAGRMTA QQFVDGMQGA ADKVAKDSSI KKQTRSA
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