| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2972 |
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| Symbol | |
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| ID | 5059436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3401861 |
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| End bp | 3402862 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640475223 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001159788 |
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| Protein GI | 145595491 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.554659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAT CGGTGTTTAG CACAAAGCCA TACGACCGGG AGTTCTTGTC GGCGGCCAAC
TCCATGGACG GTCACGAACT GGAATTCCTC GAGCCCCGGC TGACCCCGCA GACCGCCAAG
CTCGCCAGCG GCGCGGCGGC GGTCTGCGCG TTCGTCAACG ACGACCTCGG GACCGAGGTA
CTGGAGCGAC TGGCCGCGGA TGGCGTCCGC TTGATCGCAC TTCGCTCCGC CGGTTTCAAC
CACGTCGACC TGGCCACCGC CCGCCGGCTC GGCCTCACCG TCGTCCGGGT GCCGGAGTAC
TCACCGTACG CCGTGGCCGA GCACACGGTC GCCCTGATGC TCGCCCTCAA CCGCAAGGTC
TACCGGGCCT ACAACCGGGT TCGGGAGCAC AACTTCGCGC TCACCGGGCT GCTCGGCTTC
GACCTGCACG GCCGGACCGT CGGCGTCGTC GGCACCGGGA AGATCGGGTT CTGTGTGGCC
CGCATCCTGT CTGGGTTCGG CTGCCGGGTC ATCGCCAGTG ACCCCTACCC GGACGACGCG
GTGACCGCGG CCGGGATTGA GTACGTGCCG CTGCAGCGCC TACTGAGCGA GTCGGACGTG
ATCACCCTGC ACTGCCCGCT GACCCCGGAC ACCGAGCACC TGATCAACCC CGACCGGATC
GCCCAGATGC GCAGGGGCGT CATGCTGATC AATACCAGCC GCGGGGCGCT GGTGGACACG
CGAGCGGTGA TCGACGGGCT CAAGAACGGC CAGATCGGCT ATCTCGGTCT GGACGTGTAC
GAGGAGGAGA CCGACCTGTT CTTCGAGGAC CTCTCCGACC GAGTCCTCGA TGACGACGAC
TTCTCCCGGC TCAACACGTT CCCCAATGTG CTGATCACCG GTCACCAGGC ATTCTTTACC
GAAGAAGCGA TGCGCAACAT CGCCGCCACC ACGATCGACA GCCTGACCAC CATCGAGCGG
GAGGGGCCAA ACGCCGTCCC CCAGTCGGCC CGGGTTTGCT GA
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| Protein sequence | MRVSVFSTKP YDREFLSAAN SMDGHELEFL EPRLTPQTAK LASGAAAVCA FVNDDLGTEV
LERLAADGVR LIALRSAGFN HVDLATARRL GLTVVRVPEY SPYAVAEHTV ALMLALNRKV
YRAYNRVREH NFALTGLLGF DLHGRTVGVV GTGKIGFCVA RILSGFGCRV IASDPYPDDA
VTAAGIEYVP LQRLLSESDV ITLHCPLTPD TEHLINPDRI AQMRRGVMLI NTSRGALVDT
RAVIDGLKNG QIGYLGLDVY EEETDLFFED LSDRVLDDDD FSRLNTFPNV LITGHQAFFT
EEAMRNIAAT TIDSLTTIER EGPNAVPQSA RVC
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