Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2969 |
Symbol | |
ID | 5059433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3398093 |
End bp | 3399067 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475220 |
Product | hypothetical protein |
Protein accession | YP_001159785 |
Protein GI | 145595488 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.331156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAGC CGACCCAGTC GAACGACACG TTCGACGCCC CTGCACCTGT CCTGTCCGTC AGTCCGGTGG TGCTGCCAGC TCCCGGCCGC GCCGTGGACC TGCATCTGCG GGTCTCCGCG CCCGTGGCCG GAGACGAGCT ACCGATCATT CTCCTCTCGC ACGGACACGG CCCCTCAAAC CACCTGTCCT CGCTGAACGG CTACGCCCCG CTCGCGAACT ACTGGGCGGC GCACGGTTTC GTCGTCATTC AGCCCACCCA CCTGAACTCG AGGACACTGA ACCTGGATCC GGACAGTCCC GAGGCCCCCC TGTACTGGCG GTCGCGGGGC GAGGACATGA AGCGCATCCT CGACCAGCTC GACCAGATCG AGGCCGCCGT CGGGCAGTTG CGCGGGCGCC TGGACCGAGA CCGGGTCGCC GTGGCCGGGC ACTCGATGGG TGGACACACC GCGAGCCTGC TGCTGGGCGC CCGGCTGACC GACCCGCACG ACGGGACGGA GGTAGACCTC TCCGAACCCC GGATCACGGC GGGTGTGCTG CTCGCCGCGC CGGGCAGAGG CGGTGACGCC CTCACCGACT TCGTGGTCGA GAACTATCCC TTCTTCTCCA CCACCGACTT TTCCACGATG ACGACGCCCG CACTCGTGGT CGCCGGCGAC CAGGATGCCT CTACCCACCT GACGGTGCGA GGCCCGCAAT GGCACACCGA TCCCTACCTC CTCTCCCCCG GCCCCAAGTC CCTGGTCACG CTGTTCGGTG CGGGGCATGG ACTTGGTGGG GTCTCCGGCT ACGACGTGGC CGAGACCACG GACGAAAGCC CCGAGCGGGT CGCCGTCGTC CAGCGGCTCA CCTGCGCCTA CCTCCGCTCC ACCCTCTACC CTGGGGAGTC CGCCTGGCAG GAGGCGCAGG ACGAACTGAC CAGCAGGCCC AGTCCGATCG GCCGGGTCGA ATCCACGTCA ACGCCCGCGC AGTAG
|
Protein sequence | MNKPTQSNDT FDAPAPVLSV SPVVLPAPGR AVDLHLRVSA PVAGDELPII LLSHGHGPSN HLSSLNGYAP LANYWAAHGF VVIQPTHLNS RTLNLDPDSP EAPLYWRSRG EDMKRILDQL DQIEAAVGQL RGRLDRDRVA VAGHSMGGHT ASLLLGARLT DPHDGTEVDL SEPRITAGVL LAAPGRGGDA LTDFVVENYP FFSTTDFSTM TTPALVVAGD QDASTHLTVR GPQWHTDPYL LSPGPKSLVT LFGAGHGLGG VSGYDVAETT DESPERVAVV QRLTCAYLRS TLYPGESAWQ EAQDELTSRP SPIGRVESTS TPAQ
|
| |