Gene Strop_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2969 
Symbol 
ID5059433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3398093 
End bp3399067 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content69% 
IMG OID640475220 
Producthypothetical protein 
Protein accessionYP_001159785 
Protein GI145595488 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.331156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC CGACCCAGTC GAACGACACG TTCGACGCCC CTGCACCTGT CCTGTCCGTC 
AGTCCGGTGG TGCTGCCAGC TCCCGGCCGC GCCGTGGACC TGCATCTGCG GGTCTCCGCG
CCCGTGGCCG GAGACGAGCT ACCGATCATT CTCCTCTCGC ACGGACACGG CCCCTCAAAC
CACCTGTCCT CGCTGAACGG CTACGCCCCG CTCGCGAACT ACTGGGCGGC GCACGGTTTC
GTCGTCATTC AGCCCACCCA CCTGAACTCG AGGACACTGA ACCTGGATCC GGACAGTCCC
GAGGCCCCCC TGTACTGGCG GTCGCGGGGC GAGGACATGA AGCGCATCCT CGACCAGCTC
GACCAGATCG AGGCCGCCGT CGGGCAGTTG CGCGGGCGCC TGGACCGAGA CCGGGTCGCC
GTGGCCGGGC ACTCGATGGG TGGACACACC GCGAGCCTGC TGCTGGGCGC CCGGCTGACC
GACCCGCACG ACGGGACGGA GGTAGACCTC TCCGAACCCC GGATCACGGC GGGTGTGCTG
CTCGCCGCGC CGGGCAGAGG CGGTGACGCC CTCACCGACT TCGTGGTCGA GAACTATCCC
TTCTTCTCCA CCACCGACTT TTCCACGATG ACGACGCCCG CACTCGTGGT CGCCGGCGAC
CAGGATGCCT CTACCCACCT GACGGTGCGA GGCCCGCAAT GGCACACCGA TCCCTACCTC
CTCTCCCCCG GCCCCAAGTC CCTGGTCACG CTGTTCGGTG CGGGGCATGG ACTTGGTGGG
GTCTCCGGCT ACGACGTGGC CGAGACCACG GACGAAAGCC CCGAGCGGGT CGCCGTCGTC
CAGCGGCTCA CCTGCGCCTA CCTCCGCTCC ACCCTCTACC CTGGGGAGTC CGCCTGGCAG
GAGGCGCAGG ACGAACTGAC CAGCAGGCCC AGTCCGATCG GCCGGGTCGA ATCCACGTCA
ACGCCCGCGC AGTAG
 
Protein sequence
MNKPTQSNDT FDAPAPVLSV SPVVLPAPGR AVDLHLRVSA PVAGDELPII LLSHGHGPSN 
HLSSLNGYAP LANYWAAHGF VVIQPTHLNS RTLNLDPDSP EAPLYWRSRG EDMKRILDQL
DQIEAAVGQL RGRLDRDRVA VAGHSMGGHT ASLLLGARLT DPHDGTEVDL SEPRITAGVL
LAAPGRGGDA LTDFVVENYP FFSTTDFSTM TTPALVVAGD QDASTHLTVR GPQWHTDPYL
LSPGPKSLVT LFGAGHGLGG VSGYDVAETT DESPERVAVV QRLTCAYLRS TLYPGESAWQ
EAQDELTSRP SPIGRVESTS TPAQ