| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2963 |
|---|
| Symbol | |
|---|
| ID | 5059427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3391310 |
|---|
| End bp | 3392248 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640475214 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159779 |
|---|
| Protein GI | 145595482 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.138316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGGA CCCAGTCCCC CACGACCGAG GCGGTGTCGA TCGAGACCCG CAACGGGTAC
GGAACCACTC TCGCCGCCAT CGTCCACCTG CCCTCGGAGT TTGACACAGG TACGACCCAC
TCCGCGGTCG TTGTTTCCCA TACCGGCGGT GGTGTCAAGG AACAGACCGC CGGTCTGTAC
GCGAGCAAGC TCGCGGCGAG TGGGCTGGTC GCGGTCGCGT ACGACGCCTC GTTTCAGGGC
GAGAGCACCG GCACCCCGCG GCAGCTGGAA AACCCGCACA TCCGTACCGA GGACATCAGC
GCCGTCATCG ACTTCCTCAC CACGCTGCCC TACCTTGACA ACAACCAGAT CGGCGCGATG
GGCATCTGCG TCGGCGGCGG GTACAGCATC AACGCCGCGA TCAACGATCC ACGCATCAAG
GCGGTTGGCA CGGTAAGCAT GGTCAATATC GGCCAGATGT TCCGCAACGG TTGGGACGGG
TCCGGCGCCG ACGCTGATGC GGGGTCCGCG CTCGCGCAGG GGGCCGGAGC ACGCATCCAT
GACGCGAGTA GTGCGGAAAG AGAACGATAC CCTCTCGCGC CGATGCGCAA GCAGGATGCC
CAGAACCCGG AGGAGGAGGA GATCTGGGAG TATTACCACA CGCCGCGTGG TGCGCATCCG
AATGCCCCGG GCTTCATGAC AACCCGTAGT TTGAATCAGA TCATCACCTA CGACGCTTTC
CACAAGGCCG AGGTGTACTT GACTCAGCCG CTGCTGCTCA TCGCCGGCAG CGAGGACGGT
TCGAAGTGGA TGACCGAGGA CGCCCACGCC CGGGCGGCGA GCACCGACAA GTCGCTGTAT
CTCATGGACG GCGCCAACCA CATGACCCTC TACGACCGCC AGCCCTACGT CAACGATGCC
GCCTCGAAAC TGGCCCAGTT TTTCGCAGAC AAGCTCTAG
|
|---|
| Protein sequence | MPRTQSPTTE AVSIETRNGY GTTLAAIVHL PSEFDTGTTH SAVVVSHTGG GVKEQTAGLY
ASKLAASGLV AVAYDASFQG ESTGTPRQLE NPHIRTEDIS AVIDFLTTLP YLDNNQIGAM
GICVGGGYSI NAAINDPRIK AVGTVSMVNI GQMFRNGWDG SGADADAGSA LAQGAGARIH
DASSAERERY PLAPMRKQDA QNPEEEEIWE YYHTPRGAHP NAPGFMTTRS LNQIITYDAF
HKAEVYLTQP LLLIAGSEDG SKWMTEDAHA RAASTDKSLY LMDGANHMTL YDRQPYVNDA
ASKLAQFFAD KL
|
|---|
| |