Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2943 |
Symbol | |
ID | 5059407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3365125 |
End bp | 3366054 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640475194 |
Product | hypothetical protein |
Protein accession | YP_001159759 |
Protein GI | 145595462 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000846327 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACG GCGACGTAGC GGCAGGAACA CCCTCCCCGA TCGTCTCGGT CAGTCCGGTG ACCCTGCCGG CCGCGGACCG TGGCGAGGAC CTGAGGATGC GGGTCTCGGC CCCCGTGACT GGACGCGAAC TACCAATCCT CATCTTCTCG CACGGCTTCG GCAAGTCGAT GCAGGCATAC GCCCCGCTGG TCGACTACTG GGCAGCCCAC GGCTTCGTGG TGGCCCAGCC CACCCACCTC GACTCCCGCA CACTGAACAT CACGCCCGAT GATCCCCGGC ACCCGGAGAT TTGGCGCTTC CGTGTCGCCG ACCTGAAACG CACTCTCGAC CACCTCGACG TCATCGAGGC CGCCGTTCCC GGTCTCGAAG GACGACTTGA CCGTGGCCGG GTCGCCGCGG TCGGACACTC CTGGGGCGGG CAGACGGTGA GCATGCTGCT GGGCGCACGG GTCCTCGGAG CTGATGGTGT CCCCGGCGAG GACCTGGCGG ACTCCCGGAT CACCGCCGGC GTGCTGCTCT CCACCACCGG CACCGGCGGG GCCGACCTGA GTCCTTTCGC GGCCGAACAC TTTCCCTTCA TGAGCCCGAG CTTCACGGAG ATGACAACGC CGGCTCTCGT GGTCGCGGGC GACAAGGACC AGTCGCCGCT CTCCGTGCGC GGACCGGACT GGTTCACCGA TCCGTACCAC CTGAGCCCTG GCCCCAAGAG CCTGCTCACC CTGTACGGGG CGGAGCACTC CCTGGGTGGA GTCGCCGGCT ACACCGTCAC GGAAACGACC GACGAGAGTC CCGAACGAGT CGCCCTCATC CAGCGAATCA CCGTGGCCTA CCTGCGAAGC GCGCTCTATC CCGGTGACGA CACGTGGGCG ACGGTGCGTG CCGCGCTGAG GGATGACATC GATCGTCTGG GGCGGATCTC GGTCAGGTGA
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Protein sequence | MFNGDVAAGT PSPIVSVSPV TLPAADRGED LRMRVSAPVT GRELPILIFS HGFGKSMQAY APLVDYWAAH GFVVAQPTHL DSRTLNITPD DPRHPEIWRF RVADLKRTLD HLDVIEAAVP GLEGRLDRGR VAAVGHSWGG QTVSMLLGAR VLGADGVPGE DLADSRITAG VLLSTTGTGG ADLSPFAAEH FPFMSPSFTE MTTPALVVAG DKDQSPLSVR GPDWFTDPYH LSPGPKSLLT LYGAEHSLGG VAGYTVTETT DESPERVALI QRITVAYLRS ALYPGDDTWA TVRAALRDDI DRLGRISVR
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