Gene Strop_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2936 
Symbol 
ID5059400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3356580 
End bp3357506 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID640475187 
Producthypothetical protein 
Protein accessionYP_001159752 
Protein GI145595455 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00394547 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCATG AGGCGCTCAG CTCGCCAGCG ACGACCCGCC CGGCTCCGGA GATGGTCTGG 
ATCCCCGGTG GCCGGTTTCG CATGGGGTCA ACCGATTTCT ACCCCGAAGA AGGGCCCGTC
CGATGGGTCG AGGTTGACGG GTTCTGGATT GACCAGTACC TGGTGACCGT CCGGGAATTT
GATCGATTCG TCCGAGAGAC CGGTCACGTC ACGATGGCCG AGGTGTCACC GACGGCGGCG
GACTATCCCG ACGCCGACCC GGAGTTACTC GTCCCGGGCT CCCTCGTGTT TCGTAAGGCG
TCCGGGCCGG TCAGCCTCGC CGACTACCGC AACTGGTGGT CGTGGACGCC GGGCGCGACC
TGGCGTCACC CCGAGGGGCC GGGTAGCACC GTCGACGGCA GGGAACTGCA CCCCGTCACC
CACGTCGCGT ACTCCGACGC GGTGGCCTTC GCGACCTGGG CTGGCAAGGA ACTCCCGACC
GAGTCCGAGT GGGAACTCGC CGCCCGTGGC GGGCTCGACG GCGCCGTCTT CACCTGGGGA
AACGAGTTTG CCCCCGAGGG AAAGTTGATG GCCAACACCT GGCAGGGCGC GTTTCCCTGG
CAGAACCTCC TCCTCGACGG GTACGCGGGA ACCTCGCCGG TGGGAGCCTT CCCGCCCAAC
GGCCATCACC TCTATGACAT GGCCGGCAAC GTCTGGGAGT GGACCCAGGA CGTCTTCACC
TACCCTGCTG GTTCGCTGGC GAAGGCGTGC TGCACGACGC CGGTCACCGC CGACGGACCG
AGCTCGGCCA TCCCTCGTCA CGTCATCAAG GGTGGATCCC ACCTGTGCGC CCCCAACTAC
TGCATGCGGT ACCGACCGGC GGCTCGTCAG GGCGAAGCTA TCGACACCTC GACCTGCCAC
CTCGGCTTCC GGTGCGTCAG TCGGTAG
 
Protein sequence
MVHEALSSPA TTRPAPEMVW IPGGRFRMGS TDFYPEEGPV RWVEVDGFWI DQYLVTVREF 
DRFVRETGHV TMAEVSPTAA DYPDADPELL VPGSLVFRKA SGPVSLADYR NWWSWTPGAT
WRHPEGPGST VDGRELHPVT HVAYSDAVAF ATWAGKELPT ESEWELAARG GLDGAVFTWG
NEFAPEGKLM ANTWQGAFPW QNLLLDGYAG TSPVGAFPPN GHHLYDMAGN VWEWTQDVFT
YPAGSLAKAC CTTPVTADGP SSAIPRHVIK GGSHLCAPNY CMRYRPAARQ GEAIDTSTCH
LGFRCVSR