Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2936 |
Symbol | |
ID | 5059400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3356580 |
End bp | 3357506 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640475187 |
Product | hypothetical protein |
Protein accession | YP_001159752 |
Protein GI | 145595455 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00394547 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCATG AGGCGCTCAG CTCGCCAGCG ACGACCCGCC CGGCTCCGGA GATGGTCTGG ATCCCCGGTG GCCGGTTTCG CATGGGGTCA ACCGATTTCT ACCCCGAAGA AGGGCCCGTC CGATGGGTCG AGGTTGACGG GTTCTGGATT GACCAGTACC TGGTGACCGT CCGGGAATTT GATCGATTCG TCCGAGAGAC CGGTCACGTC ACGATGGCCG AGGTGTCACC GACGGCGGCG GACTATCCCG ACGCCGACCC GGAGTTACTC GTCCCGGGCT CCCTCGTGTT TCGTAAGGCG TCCGGGCCGG TCAGCCTCGC CGACTACCGC AACTGGTGGT CGTGGACGCC GGGCGCGACC TGGCGTCACC CCGAGGGGCC GGGTAGCACC GTCGACGGCA GGGAACTGCA CCCCGTCACC CACGTCGCGT ACTCCGACGC GGTGGCCTTC GCGACCTGGG CTGGCAAGGA ACTCCCGACC GAGTCCGAGT GGGAACTCGC CGCCCGTGGC GGGCTCGACG GCGCCGTCTT CACCTGGGGA AACGAGTTTG CCCCCGAGGG AAAGTTGATG GCCAACACCT GGCAGGGCGC GTTTCCCTGG CAGAACCTCC TCCTCGACGG GTACGCGGGA ACCTCGCCGG TGGGAGCCTT CCCGCCCAAC GGCCATCACC TCTATGACAT GGCCGGCAAC GTCTGGGAGT GGACCCAGGA CGTCTTCACC TACCCTGCTG GTTCGCTGGC GAAGGCGTGC TGCACGACGC CGGTCACCGC CGACGGACCG AGCTCGGCCA TCCCTCGTCA CGTCATCAAG GGTGGATCCC ACCTGTGCGC CCCCAACTAC TGCATGCGGT ACCGACCGGC GGCTCGTCAG GGCGAAGCTA TCGACACCTC GACCTGCCAC CTCGGCTTCC GGTGCGTCAG TCGGTAG
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Protein sequence | MVHEALSSPA TTRPAPEMVW IPGGRFRMGS TDFYPEEGPV RWVEVDGFWI DQYLVTVREF DRFVRETGHV TMAEVSPTAA DYPDADPELL VPGSLVFRKA SGPVSLADYR NWWSWTPGAT WRHPEGPGST VDGRELHPVT HVAYSDAVAF ATWAGKELPT ESEWELAARG GLDGAVFTWG NEFAPEGKLM ANTWQGAFPW QNLLLDGYAG TSPVGAFPPN GHHLYDMAGN VWEWTQDVFT YPAGSLAKAC CTTPVTADGP SSAIPRHVIK GGSHLCAPNY CMRYRPAARQ GEAIDTSTCH LGFRCVSR
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